Protein Info for LU632_RS22325 in Erwinia tracheiphila SCR3

Name: plsB
Annotation: glycerol-3-phosphate 1-O-acyltransferase PlsB

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 806 TIGR03703: glycerol-3-phosphate O-acyltransferase" amino acids 12 to 800 (789 residues), 1169.9 bits, see alignment E=0 PF01553: Acyltransferase" amino acids 283 to 425 (143 residues), 98.7 bits, see alignment E=2.4e-32 PF19277: GPAT_C" amino acids 436 to 772 (337 residues), 368.1 bits, see alignment E=5.1e-114

Best Hits

Swiss-Prot: 79% identical to PLSB_ESCF3: Glycerol-3-phosphate acyltransferase (plsB) from Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73)

KEGG orthology group: K00631, glycerol-3-phosphate O-acyltransferase [EC: 2.3.1.15] (inferred from 90% identity to ebi:EbC_03060)

MetaCyc: 78% identical to glycerol-3-phosphate 1-O-acyltransferase (Escherichia coli K-12 substr. MG1655)
Glycerol-3-phosphate O-acyltransferase. [EC: 2.3.1.15]; 2.3.1.15 [EC: 2.3.1.15]; 2.3.1.15 [EC: 2.3.1.15]; 2.3.1.15 [EC: 2.3.1.15]; 2.3.1.15 [EC: 2.3.1.15]

Predicted SEED Role

"Glycerol-3-phosphate acyltransferase (EC 2.3.1.15)" in subsystem Glycerolipid and Glycerophospholipid Metabolism in Bacteria (EC 2.3.1.15)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.3.1.15

Use Curated BLAST to search for 2.3.1.15

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (806 amino acids)

>LU632_RS22325 glycerol-3-phosphate 1-O-acyltransferase PlsB (Erwinia tracheiphila SCR3)
MSGWRSFYYNTLNLPVKVLVRSKAIPKDPITELGLDTSRPIMYVLPYDSKADLLALREQC
RKQELPDPLKPLEIDGTVLPRHVFIHDGPRLFPYFVPNLESVRLFHDYLDLHRSNPHLDV
QMVPVSVMFGRAPGREIQGEEQPHLRMLNGIQKFCAVLWLGRDSFVRFSPMVSMRRMATE
HGTDKTIAQKLARVARIHFARQRLAAIGPRLPVRQDLFNKLLQSKAIVKAIEDEARGKKI
SLDKAQQNAVELMEEIAADFSYEAIRLTDRVMGWLWSKLYQGINVNGGERVRQLAQDGHE
IVYVPCHRSHMDYLLLSYVLYHQGLVPPHIAAGINLNFWPAGQIFRRLGAFFIRRTFKGN
KLYSTVFREYLGELFTRGYSIEYFVEGGRSRTGRLLDPKTGTLSMTIQAMLRGGNRPITL
VPIYIGYEHVMEVSTYAKELRGATKEKEGFMQMVRGLRKLRNLGQGYVNFGEPLPLVSYL
NRQVPEWREAIDPLEAQRPAWLAPAVNDIAQRMMVRINNAGAANAMNLCVTALLASRQRS
LTREQMIDQLDCYTQLLRNVPYSPDATVPDLTPEKLLDHALGMNKFEIEQDNIGEIIGLP
REQAVLMTYYRNNIHHMLVMPSVIAVILTQHREVTRAELLRQVSVIYPMLKSELFLRWEK
DELPVLLDALIGEMAHQGLLNADEQALRLSALRFHTLQLLAAGVRETLQRYAITFSILSA
NPSINRGTLEKESRTMAQRLSVLHGINAPEFFDKAVFSTLVLTLRDEGYISDTGDALVEE
THKVYQMLADLITHEVRMTIESAVAQ