Protein Info for LU632_RS21670 in Erwinia tracheiphila SCR3

Name: opgB
Annotation: phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 767 transmembrane" amino acids 27 to 48 (22 residues), see Phobius details amino acids 77 to 99 (23 residues), see Phobius details amino acids 110 to 129 (20 residues), see Phobius details PF00884: Sulfatase" amino acids 163 to 449 (287 residues), 88.7 bits, see alignment E=2.2e-29

Best Hits

KEGG orthology group: K01002, phosphoglycerol transferase [EC: 2.7.8.20] (inferred from 74% identity to ebi:EbC_38930)

Predicted SEED Role

"Phosphoglycerol transferase I (EC 2.7.8.20)" (EC 2.7.8.20)

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.7.8.20

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (767 amino acids)

>LU632_RS21670 phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase (Erwinia tracheiphila SCR3)
MSAELLSLILFTASATLYSWKAGRNRLWFAAMLLFLGMNILLNASMLASNYFTGEGINDA
VIYTITSSLNGAGISKYILPGIGLIAVIMLLFAALSWILRLRKIHTGNKIYSLLAVILAV
ASVKTTPAYQQVADLIKSQVGKGNSDFDNYYKTPEKQIVGNKPNLVYIYAESLERTYFDE
QAFPALAPELSRIKNNSLDFSNTGQMPGTEYTIAGMVASQCGIPLFAPFDGNASSSLSTF
YPQNVCLGDILKSSGYENYFYQGANLNFAGKNIFLSSHGFDSDNLYGFNELKKVVKNQNY
RNDWGWYDDTVLDMVFDKYLELSRLNSPFSLFALTVDTHHPDGFISRSCQRQSGSYDGKP
NKSFAAVACSQEHIARLIERIRATPYFKNTIIVVSSDHLAMNNTAWKYLNQHDRRNLFFI
IRGDAPASKLIPVKRSSLDNGATVLDAMGGDNFIGLGRSSLSATSLATTFLNLKEKMIEW
KPDIIRLWNFPKTIADYSIDTDKNTFTFSGVHFKLPLLLSVMPNKIEPKFDVYLAPPLKQ
QLAQFPADEKFVWVDRCFKIGTVWDNTLALNRNYCVAWGTLNSPPLITEIKAGLTAGRVA
FQQGSERQDEQYQQAVSRLKIADDDVRYQSDTILFSLPGLPTQVQKASGLSYVEPWGGRW
SDANLQSHVSIHYREPLPTSFVLELTGRAFDGNSQQPFVIKVGNVAHQFSLGNTDSTVSV
AFSLVDQSDIIEIFSASSQETSEGAIDGFKARRLGIGLSSLKITPIP