Protein Info for LU632_RS09870 in Erwinia tracheiphila SCR3

Name: mukF
Annotation: chromosome partition protein MukF

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 440 PF03882: KicB" amino acids 3 to 117 (115 residues), 186.2 bits, see alignment E=2.7e-59 PF17192: MukF_M" amino acids 121 to 281 (161 residues), 274.3 bits, see alignment E=4.8e-86 PF17193: MukF_C" amino acids 283 to 440 (158 residues), 261.9 bits, see alignment E=3.9e-82

Best Hits

Swiss-Prot: 86% identical to MUKF_ESCF3: Chromosome partition protein MukF (mukF) from Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73)

KEGG orthology group: K03633, chromosome partition protein MukF (inferred from 93% identity to ebi:EbC_15140)

Predicted SEED Role

"Chromosome partition protein MukF" in subsystem DNA structural proteins, bacterial or MukBEF Chromosome Condensation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (440 amino acids)

>LU632_RS09870 chromosome partition protein MukF (Erwinia tracheiphila SCR3)
MSEFSQTLPELVAWARKNDFSVTLPGERLTFLLAIATLNGERMDGEMSEGELTDAFRHVS
EGFDQTSETVVVRANNAINDMVRQRLLNRFSSEHAEGNAIYRLTPLAIGITDYYIRQREF
STLRLSMQLSIVAGELKRAADAAEEDGDEFHWHRNVFAPLKYSVAEIFDSIDISQRVMDE
QQQLVKGDIGQLLNKDWRAAISSCEQLLSETSGTLRELQDTLEAAGDKLQANLLRIQDAT
LSSPDLGFIDKLVFDLQNKLDRIISWGQQAIDLWIGYDRHVHKFIRTAIDMDKNRVFAQR
LRQSVQSYFEAPWALTYASADRLFDVRDEELALRNEEVTGELPSELEYEEFNEIREQLAA
MIEEALAFYKAQKKPLNLGVVMREYLAQYPRARHFDVARIVVDQAVRLGVAEADFSGLPA
EWQVINDYGAKVQAHVIDKY