Protein Info for LU632_RS08765 in Erwinia tracheiphila SCR3

Name: wbaP
Annotation: undecaprenyl-phosphate galactose phosphotransferase WbaP

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 477 transmembrane" amino acids 12 to 36 (25 residues), see Phobius details amino acids 54 to 72 (19 residues), see Phobius details amino acids 90 to 109 (20 residues), see Phobius details amino acids 115 to 135 (21 residues), see Phobius details amino acids 284 to 307 (24 residues), see Phobius details TIGR03022: undecaprenyl-phosphate galactose phosphotransferase WbaP" amino acids 17 to 477 (461 residues), 525 bits, see alignment E=2.3e-161 TIGR03025: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase" amino acids 22 to 477 (456 residues), 387.3 bits, see alignment E=1.2e-119 PF13727: CoA_binding_3" amino acids 85 to 206 (122 residues), 28.7 bits, see alignment E=1.3e-10 PF02397: Bac_transf" amino acids 281 to 472 (192 residues), 218 bits, see alignment E=7.2e-69

Best Hits

Swiss-Prot: 81% identical to AMSG_ERWAM: UDP-galactose-lipid carrier transferase (amsG) from Erwinia amylovora

KEGG orthology group: K00996, undecaprenyl-phosphate galactose phosphotransferase [EC: 2.7.8.6] (inferred from 84% identity to ebi:EbC_29440)

MetaCyc: 63% identical to undecaprenyl-phosphate galactose phosphotransferase (Salmonella enterica enterica serovar Typhi)
Undecaprenyl-phosphate galactose phosphotransferase. [EC: 2.7.8.6]

Predicted SEED Role

"Undecaprenyl-phosphate galactosephosphotransferase (EC 2.7.8.6)" (EC 2.7.8.6)

MetaCyc Pathways

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.7.8.6

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (477 amino acids)

>LU632_RS08765 undecaprenyl-phosphate galactose phosphotransferase WbaP (Erwinia tracheiphila SCR3)
MSNIKFTSKGLLIRLSLSLSDLFSFNASLFIAIWLMNALPGHLLNEYTAQDLRLTIITHI
ILSLICVGWFWVRLRHYTYRKPFWFELKEIFRSVLIFSVIDLSITALSEWELSRWIWVLT
WLLALIFIPAGRAVVKRTLNRYNLWKRQSIIIGSGKNAEEAWMALQSEEMMGFDVVAFYD
VDGATSALELFSTPVIRTEAALWELVDVDTQLIVAVEFEQRQYRDLWLKNLAKHDCRAVS
VIPSLRGVPLYGTDMAYIFSHEVMILRVSNNLAKRTSRFLKRAFDIVGAMSIMIALMPAL
AVLIFLVSRDGGSPIYGHERVGLNGRKFKCLKFRSMVVNSKEVLEEVLRTDPVARAEWDK
DFKLKNDPRITRVGHFIRKTSLDELPQLWNVVRGEMSLVGPRPVIEDELERYAGDVDYYY
MAKPGMTGLWQVSGRNDVDYETRVYFDSWYVKNWSLWNDIAILFKTIGVVLKRDGAY