Protein Info for LU632_RS03280 in Erwinia tracheiphila SCR3

Annotation: AvrE-family type 3 secretion system effector

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1500 1600 1700 1775 PF11725: AvrE_T3Es" amino acids 234 to 1767 (1534 residues), 2079.6 bits, see alignment E=0

Best Hits

KEGG orthology group: None (inferred from 64% identity to epy:EpC_30660)

Predicted SEED Role

"FIG00635048: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1775 amino acids)

>LU632_RS03280 AvrE-family type 3 secretion system effector (Erwinia tracheiphila SCR3)
MKLRLHGAEQKAVVQKTENKTTGKGAALQQGSGSSTPQAAAGSLATDGRNRGKLPNVHQQ
DTGEDGSSPARQKKKSFSFSRLFGKKSSKSSSQPATTSAPENVRGKGNTLRELMANDGES
HDQPAGASLTRSGGCRRSSLEDMAGRPINKTGISGQQPQNAPLRGPARGTTLAELLARPE
ECAETPPASPQGEPRLTRSGGVKRHDLADMKGREIARGDGEEPAPAHMKQQQLQISLQEG
KLKLSGTNPSAINMLLSQTLGKEDQHYLAHNVSSDGSQHQLLDKQGRLFDIKSNENGYSV
LHNSQSAELKSKLEQAGDAPVSLSSHNGKLQISIGENGKNKMVLSEPGSAHHAILSGVWQ
HPAGVAEKEGQAVCLHDDKLHLLNSSLGLWQSASDTSYSNLSRQADGKLYAVKDDQTLSN
LSENQSSEKFIDKIKSFSVGKNGQVAVLADTESAHHMCLLPSIDAKPEDRSYFSLRLADT
PEMRQPEQPHPEVQSVAMSNGRLFAADSEGKLHIGLLKQIDNNELPMKNMPQKVLEQHYG
RNHRIEGFFTDHKGQLNVLVKDNFRQQHACPLGDDDQFHPGWNMTDTMVINNQLGLHHIS
PEPHKILDMAHLGSLALKDGSVHYFDLLTKGWTSAGFDCKQLKKGLDGTAYILKDGEVKR
LDINQTTSSIRQGKDNFFALPHVRNKPEPGVALQGLNKSDKAQAIAVIGVNHYFALTEKG
DIRSYQIKPGTQQLARQVQSLDLEGITGALKDIHVDQQHNLYAVNQDGEVFHQSREQWQS
GEAGGGWKKLTGPQNKSDLQRLEMDNEHRLVATMTDTTQHQLKEGEWHPYQSPESGPLDV
GTRESQAVFGRLSQGMKGVRIPGTGLTVNVSAQAAGMNGIENRKIKSKFADRVRAYVFNP
TMKTPRPIKNAAYSMQHNWKGRRGLQPLYEMQGALIKQLESHNVLKQGMQPDLKSKLEKM
DLGKHGETLLNDMKHFREELEQSAIRSATILGQHQGVLTRNGTANEDFRLSPTKGVVQSF
NVNRSGRDLSKALEKAVTIAPPSPASENKLHTLLSDFISKGVNMSHQKADIPLGRQRDPN
DQTALTKSRLILDIITLGDMHQLADKASLISGGQPDSEQIRQLRQEFDALRQKQYGDNPV
KQYTDMGFTNHGALEADYDAVKAFINAFKKEHHGVNLTARTVLETHGNAELVEKLKDTLL
SMGSGESMSFSRSYSAGLSSVFVPTLNRVPVPIVPGAGVALERAYNLTFGRTPGGLNVSF
GRGGGVNGTIFLATGYDLMPYMTGKKTTAENASDWLSKQHKISPDFRIGGAVSASLQGTL
LNGIDFKLTEDELPGFLHGLTQGTLTPTELMQKGIEHQMMQGRRLVYNVDTSAAFDLRAG
IDMTRDGSKPDGVTARISAGVSGSLNLVSGLSERITETGEFGRTQTSSDNSLTFFNSASV
GANLTASVGVAHGFTHDGKVTANATSAPATSVGTFPAFTSTNVSVALAMDDRTTQNIILG
LKQAEPVTNHDISELKSMLKKHFRDSDSVNLLKALEKDENPDPVEHLDKLSKHFNTRSTA
DDDRYQAIRTLKKLVARQMCVATNSQELGSAMHLTTYTNLSRLDENGILDVLRRHIDAAL
LPSRADRIRSMMDNDPVLKDLIKQLQTTPFSYAIVSMELKDVVRDAAEKAMLEGKLGREE
LGALFQDPDYLRIKSVSVIQSATKSEGFNTPAMLLRASNSAGMSMERNIGTINFEYGRDQ
DTPRCFTLEGAIAEANPEVASALTGLKKEGFEMKG