Protein Info for LRK53_RS14580 in Rhodanobacter sp000427505 FW510-R12

Annotation: molybdenum ABC transporter ATP-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 357 TIGR02142: molybdate ABC transporter, ATP-binding protein" amino acids 8 to 355 (348 residues), 371 bits, see alignment E=3.3e-115 PF00005: ABC_tran" amino acids 22 to 162 (141 residues), 106.1 bits, see alignment E=3.6e-34 PF03459: TOBE" amino acids 294 to 356 (63 residues), 31.4 bits, see alignment E=2.7e-11

Best Hits

Swiss-Prot: 49% identical to MODC_THIDA: Molybdenum import ATP-binding protein ModC (modC) from Thiobacillus denitrificans (strain ATCC 25259)

KEGG orthology group: K02017, molybdate transport system ATP-binding protein [EC: 3.6.3.29] (inferred from 50% identity to lch:Lcho_1358)

Predicted SEED Role

"Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)" in subsystem Molybdenum cofactor biosynthesis or Transport of Molybdenum (TC 3.A.1.8.1)

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.6.3.29

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (357 amino acids)

>LRK53_RS14580 molybdenum ABC transporter ATP-binding protein (Rhodanobacter sp000427505 FW510-R12)
MTEPVPGIELRLQLRRTNFALDVALSLPAQGVAVVFGPSGSGKSTLLRAIAGLEPHTRGL
LRVGAETWQDAHVRLPPHRRRVGVVFQHAALLPHLSVHDNLRYGWRRAGAPTGVMQEWID
KLALGPLLARPPATLSGGEQQRVALGRALVCQPRWLLLDEPLSALDAERRGEILPYLEAI
RRETRIPLLYVTHAVEEAARLADHLVLLEAGRVRIAGPALEVLNRGDLPLALRDDAATVI
EASVLGHDGHGLLRLGTPAGTLHAHGPAHPAGTRVRLRVQARDVSVALSAHTDTSVLNIV
PAVLQSLSPLSNGQLQLQLLAGGLPLLARVSHQSALRLQLREGLAVWVQIKSVALLV