Protein Info for LRK53_RS04875 in Rhodanobacter sp000427505 FW510-R12

Annotation: SMP-30/gluconolactonase/LRE family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF08450: SGL
  • amino acids 11 to 254 (244 residues), 242.2 bits, E=3.3e-76

Best Hits

KEGG orthology group: K13874, L-arabinonolactonase [EC: 3.1.1.15] (inferred from 57% identity to bpy:Bphyt_3407)

Predicted SEED Role

"L-arabinolactonase (EC 3.1.1.15)" in subsystem L-Arabinose utilization (EC 3.1.1.15)

MetaCyc Pathways

• L-arabinose degradation III (2/6 steps found)
• L-arabinose degradation V (2/6 steps found)
• L-arabinose degradation IV (3/8 steps found)
• superpathway of pentose and pentitol degradation (5/42 steps found)

KEGG Metabolic Maps

• Ascorbate and aldarate metabolism

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.1.1.15

Protein Sequence (318 amino acids)

>LRK53_RS04875 SMP-30/gluconolactonase/LRE family protein (Rhodanobacter sp000427505 FW510-R12)
MDVALDAGNALGEGIVWCERAQALYWTDIQRAMLYRLHPASGALEQWPMPERLASFALCE
TDGWLLLALASQLAFFRLADNQLQTLHQVEPGLPTRCNDGACDRQGRFVFGTMHEPAEGS
RQALGSFWRLDVDLSLERLALPNVAISNSIAFSPEGTTMYYCDSLSRNIQCCAYGDTLGT
PHLFADLGDVAGEPDGSCVDADGSLWNAQWGMSRVVRYRPDGREDRIVPVPTRQPTRPAF
GGAALDTLYVTSAHDGLDSVTLARDPLAGALFAARVGAHGLPEPRFAGVPSVAMHRDPPN
QQQARSHRRHRIHPGRNP