Protein Info for KEDOAH_23435 in Escherichia coli ECRC99

Name: ureF
Annotation: Urease accessory protein UreF

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 224 PF01730: UreF" amino acids 38 to 181 (144 residues), 118 bits, see alignment E=2.3e-38

Best Hits

Swiss-Prot: 100% identical to UREF_ECO57: Urease accessory protein UreF (ureF1) from Escherichia coli O157:H7

KEGG orthology group: K03188, urease accessory protein (inferred from 100% identity to eoi:ECO111_1231)

Predicted SEED Role

"Urease accessory protein UreF" in subsystem Urea decomposition

MetaCyc Pathways

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (224 amino acids)

>KEDOAH_23435 Urease accessory protein UreF (Escherichia coli ECRC99)
MPTPEKRLRLMQLASNSLPVGGYSWSQGLEWAVEAGWVEDSAAFEHWQQLQMEQSFFAVD
LPLLARLYRACEAGDPDSAGRWTAYLLACRETRELRDEERNRGAAFTRLLVDWQPDCPAE
WRKLCQQSQLTGMAWLGVRWQISVSDLALSLGYSWIESAVMAGVRLVPYGQLAAQQLIMR
LCARYAANMDSALATPDHAIGSATPLASIASARHETQYSRLFRS