Protein Info for JDDGAC_17695 in Escherichia coli ECRC98

Name: yihN
Annotation: Inner membrane protein YihN

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 421 signal peptide" amino acids 1 to 23 (23 residues), see Phobius details transmembrane" amino acids 46 to 67 (22 residues), see Phobius details amino acids 74 to 91 (18 residues), see Phobius details amino acids 97 to 119 (23 residues), see Phobius details amino acids 143 to 165 (23 residues), see Phobius details amino acids 171 to 189 (19 residues), see Phobius details amino acids 221 to 242 (22 residues), see Phobius details amino acids 248 to 268 (21 residues), see Phobius details amino acids 289 to 308 (20 residues), see Phobius details amino acids 314 to 337 (24 residues), see Phobius details amino acids 351 to 374 (24 residues), see Phobius details amino acids 386 to 406 (21 residues), see Phobius details PF07690: MFS_1" amino acids 33 to 364 (332 residues), 91.1 bits, see alignment E=3.5e-30

Best Hits

Swiss-Prot: 99% identical to YIHN_ECOLI: Inner membrane protein YihN (yihN) from Escherichia coli (strain K12)

KEGG orthology group: None (inferred from 99% identity to eco:b3874)

Predicted SEED Role

"Putative resistance protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (421 amino acids)

>JDDGAC_17695 Inner membrane protein YihN (Escherichia coli ECRC98)
MLTKKKWALFSLLTLCGGTIYKLPSLKDAFYIPMQEYFHLTNGQIGNAMSVNSFVTTVGF
FLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGVTCDMMNWPVLLK
SVSRLGNSEQQGRLFGFFETGRGIVDTVVAFSALAVFTWFGSGLLGFKAGIWFYSLIVIA
VGITIFFVLNDKEEAPSVEVKKEDGASQNTSMTSVLKDKTIWLIAFNVFFVYAVYCGLTF
FIPFLKNIYLLPVALVGAYGIINQYCLKMIGGPIGGMISDKILKSPSKYLCYTFIISTAA
LVLLIMLPHESMPVYLGMACTLGFGAIVFTQRAVFFAPIGEAKIAENKTGAAMALGSFIG
YAPAMFCFSLYGYILDLNPGIIGYKIVFGIMACFAFCGAVVSVMLVKRISQRKKEMLAAE
A