Protein Info for JDDGAC_15075 in Escherichia coli ECRC98

Name: yjiL
Annotation: Uncharacterized protein YjiL

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 255 TIGR00241: putative CoA-substrate-specific enzyme activase" amino acids 3 to 247 (245 residues), 359.5 bits, see alignment E=4.8e-112 PF01869: BcrAD_BadFG" amino acids 5 to 248 (244 residues), 252.1 bits, see alignment E=3.6e-79

Best Hits

Swiss-Prot: 98% identical to YJIL_ECOLI: Uncharacterized protein YjiL (yjiL) from Escherichia coli (strain K12)

KEGG orthology group: None (inferred from 100% identity to etw:ECSP_5421)

MetaCyc: 45% identical to lactoyl-CoA dehydratase archerase monomer (Anaerotignum propionicum)
EICOMP-RXN [EC: 5.6.1.9]

Predicted SEED Role

"FIG00638665: hypothetical protein"

Isozymes

No predicted isozymes

Use Curated BLAST to search for 5.6.1.9

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (255 amino acids)

>JDDGAC_15075 Uncharacterized protein YjiL (Escherichia coli ECRC98)
VTYSIGIDSGSTATKGILLADGVITRRFLVPTPFRPATAITEAWETLREGLETTPFLTLT
GYGRQLVDFADKQVTEISCHGLGARFLAPATRAVIDIGGQDSKVIQLDDDGNLCDFLMND
KCAAGTGRFLEVISRTLGTSVEQLDCITENVTPHAITSMCTVFAESEVISLRSAGVAPEA
ILAGVINAMARRSANFIARLSCEAPILFTGGVSHCQTFARMLESHLRMPVNTHPDAQFAG
TIGAAVIGQRVRTRR