Protein Info for IAI46_23585 in Serratia liquefaciens MT49

Annotation: FUSC family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 691 transmembrane" amino acids 18 to 47 (30 residues), see Phobius details amino acids 59 to 77 (19 residues), see Phobius details amino acids 83 to 102 (20 residues), see Phobius details amino acids 111 to 129 (19 residues), see Phobius details amino acids 136 to 153 (18 residues), see Phobius details amino acids 366 to 383 (18 residues), see Phobius details amino acids 389 to 406 (18 residues), see Phobius details amino acids 413 to 430 (18 residues), see Phobius details amino acids 435 to 451 (17 residues), see Phobius details amino acids 457 to 476 (20 residues), see Phobius details amino acids 482 to 504 (23 residues), see Phobius details TIGR01667: integral membrane protein, YccS/YhfK family" amino acids 12 to 671 (660 residues), 631.4 bits, see alignment E=9.2e-194 PF12805: FUSC-like" amino acids 63 to 330 (268 residues), 193.1 bits, see alignment E=5.7e-61 PF13515: FUSC_2" amino acids 378 to 497 (120 residues), 81.3 bits, see alignment E=7e-27

Best Hits

Swiss-Prot: 67% identical to YHFK_ECOLI: Uncharacterized protein YhfK (yhfK) from Escherichia coli (strain K12)

KEGG orthology group: None (inferred from 97% identity to spe:Spro_4581)

Predicted SEED Role

"FIG01219693: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (691 amino acids)

>IAI46_23585 FUSC family protein (Serratia liquefaciens MT49)
MWRRVIYHPEVNYALRQTLVLCLPVLLGLLIGQLQYGLLFSLVPACCNIAGLDTPHKRFF
KRLIVGGSLFALSSLLLQQALLWQVPLPALMLGLALLLGVSGEISPLHARLLPAALVAAI
FSLSMAGTVPLWHAPVLYIVGTAWYGLFTWFWFKLWKEQPMRESLNQLYLELADYFEAKY
SLLTQHTDPQTALPPLLVRQQKVMDLITLLYQQLNFLPHASNLEQKRLQRTFQVALDLQE
HITVSLHLPEEVQKLVEQSQAEAIIRRNAQVIANRLRTVAHDILYHQHSQRFNMDHELAA
LEKVAAQHPDNPVGQFCYYHFSRIARLLRTQHPLYRRDLMANQNRLPFWPALVSYLSFKS
NALRNAARLGVTLAAGSSLGMIFNLPKPYWILLTIMLVSQNGYNATRVRIQHRALGTLVG
LVIAAGLLQLQLPEAETLGVMLVITLLAYLVSRKNYGLAVIGFTVTAVYTLQLLALNGTH
FLVPRLIDTLIGCVLVFGSTIWLWPQWQSGLLRKNAHQALENDQQALRLLLEEQEPDPSA
LAYARMQVNQAHNALFTSLNQAMQEPGFESSYLADMRLWVTHSQFIVEHLNAMTILAREH
YMLTPKLAEEYLQSCEIALQSCQQRLEYDGPSSGNGIMQPPDLQPDMPVTEMERHLRRIL
SHLSVMHTISSLAWRQRPHHGIWLKRKLRDQ