Protein Info for IAI46_23050 in Serratia liquefaciens MT49
Annotation: maltoporin
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 93% identical to LAMB_SERP5: Maltoporin (lamB) from Serratia proteamaculans (strain 568)
KEGG orthology group: None (inferred from 95% identity to srr:SerAS9_4571)MetaCyc: 75% identical to maltose outer membrane channel / phage lambda receptor protein (Escherichia coli K-12 substr. MG1655)
RXN0-1741; RXN0-1804
Predicted SEED Role
"Maltoporin (maltose/maltodextrin high-affinity receptor, phage lambda receptor protein)" in subsystem Maltose and Maltodextrin Utilization or Trehalose Uptake and Utilization
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (431 amino acids)
>IAI46_23050 maltoporin (Serratia liquefaciens MT49) MMTTLRKLPLALAIAAGVLTTQAMAVDFKGYARSGIGWTGSGGEQQCFQATGAGSKYRLG NECETYAELKLGQEVWKEGDKSFYFDTNLAYSVSQRSDFESVSPGFREVNVQGKNLIEWL PGANMWAGKRFYQRHDVHMIDFYYWDISGPGAGLENIDLGFGKLSAAVTRNSESGGSYGY LDNEWDQRPTVNDTFDVRLAGLELNPGGTLELGVDYGRANTQDGYHLADGASKDGWMFTA EHTQSILTGYNKFVVQYATDSMTSQNNGRNQGSTIDNNGKMIRVLDHGAIDFNDQWALMY VGMFQDVDRDNNNGTTWYTVGVRPMYKWTPIMSTLLEAGYDNVKSQRTGDRNGQYKVTLA QQWQAGNSIWSRPAIRVFATYAKWDEKWGYANNDSGAGYTSGTAYNDTSLHTFSRGNDDE VTFGAQMEIWW