Protein Info for IAI46_21890 in Serratia liquefaciens MT49

Annotation: cell division protein FtsP

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 471 signal peptide" amino acids 1 to 28 (28 residues), see Phobius details PF07732: Cu-oxidase_3" amino acids 53 to 166 (114 residues), 85.3 bits, see alignment E=3.4e-28 PF07731: Cu-oxidase_2" amino acids 360 to 469 (110 residues), 52 bits, see alignment E=6.6e-18

Best Hits

Swiss-Prot: 83% identical to FTSP_YERPE: Cell division protein FtsP (ftsP) from Yersinia pestis

KEGG orthology group: K04753, suppressor of ftsI (inferred from 97% identity to spe:Spro_4257)

Predicted SEED Role

"Putative cell division protein precursor"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (471 amino acids)

>IAI46_21890 cell division protein FtsP (Serratia liquefaciens MT49)
MSLSRRQFIQASGLALCAGAVPLRAEASGTQTPLPVPPLLESRRGQPLFLTLQRAHWAFM
DNRKASVWGINGMYLGPTVRVYNGDDVKLIYSNRLPEPVAMTISGLQVPGTLMGGAPRMM
SPNVDWSPVLPIRQNAATCWYHASTPNRMAPHVYNGLTGLWLVEDEVSKSLPLPNHYGVD
DFPLIIQDKRLDNFGTPEYDPPSQGGFVGDTLLVNGVQNPYIEVSRGWVRLRLLNASNSR
RYMLQLSDGRPLNVIASDQGFLPAPVAVQQLSLAPGERREVLIDMSKGDEVTITAGEAAG
IMDRLRGLFEPSSILVSTQVLTLKPTGLLPLVTDNLPMRLLADQLLDGSVSRTREFRLGD
SQAGINGAIWDMNRIDVQTQQGSWERWNIHADTPQAFHIQGVQFLVKRVNGAQPMAEDRG
WKDTVWIDGDVELLVYFNQSTSEHFPFLYYSQTLEMADRGSAGQFMVQPAL