Protein Info for IAI46_21275 in Serratia liquefaciens MT49

Annotation: hypoxanthine phosphoribosyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 178 TIGR01203: hypoxanthine phosphoribosyltransferase" amino acids 7 to 173 (167 residues), 245.8 bits, see alignment E=9.2e-78 PF00156: Pribosyltran" amino acids 13 to 160 (148 residues), 101.7 bits, see alignment E=1.3e-33

Best Hits

Swiss-Prot: 90% identical to HPRT_SALTY: Hypoxanthine phosphoribosyltransferase (hpt) from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)

KEGG orthology group: None (inferred from 99% identity to srr:SerAS9_4205)

MetaCyc: 89% identical to hypoxanthine phosphoribosyltransferase (Escherichia coli K-12 substr. MG1655)
Hypoxanthine phosphoribosyltransferase. [EC: 2.4.2.8]; 2.4.2.8 [EC: 2.4.2.8]

Predicted SEED Role

"Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)" in subsystem Purine conversions (EC 2.4.2.8)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.4.2.8

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (178 amino acids)

>IAI46_21275 hypoxanthine phosphoribosyltransferase (Serratia liquefaciens MT49)
MKHTVDVMISEQEVKTRIAELGRQITEHYRDSGSDMVLVGLLRGSFMFMADLCRTIEVPH
EVDFMTASSYGSGMSTTRDVKILKDLDEDIRGKDVLIVEDIIDSGNTLNKVREILALRGP
KSLAICTLLDKPERREVEVPVEYVGFSIPDEFVVGYGIDYAQRYRHLPYVGKVVLLDE