Protein Info for IAI46_19105 in Serratia liquefaciens MT49

Annotation: hydroxyethylthiazole kinase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 264 TIGR00694: hydroxyethylthiazole kinase" amino acids 17 to 262 (246 residues), 284.5 bits, see alignment E=3.6e-89 PF02110: HK" amino acids 17 to 261 (245 residues), 297.5 bits, see alignment E=3.7e-93

Best Hits

Swiss-Prot: 94% identical to THIM_SERP5: Hydroxyethylthiazole kinase (thiM) from Serratia proteamaculans (strain 568)

KEGG orthology group: K00878, hydroxyethylthiazole kinase [EC: 2.7.1.50] (inferred from 94% identity to spe:Spro_3578)

MetaCyc: 63% identical to hydroxyethylthiazole kinase (Escherichia coli K-12 substr. MG1655)
Hydroxyethylthiazole kinase. [EC: 2.7.1.50]; 2.7.1.50 [EC: 2.7.1.50]; Choline kinase. [EC: 2.7.1.50, 2.7.1.32]

Predicted SEED Role

"Hydroxyethylthiazole kinase (EC 2.7.1.50)" in subsystem Thiamin biosynthesis (EC 2.7.1.50)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.7.1.32 or 2.7.1.50

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (264 amino acids)

>IAI46_19105 hydroxyethylthiazole kinase (Serratia liquefaciens MT49)
MLARPDVFPGACAAACLTQFKRQSPLIHCLTNEVVQELTANVLLALGASPAMVVEPTEAA
QFSRLADAVLINVGTLNASRAESMLAAVEAANVAQTPWTLDPVAVGGLVYRTAFAHRLLG
EKPAAIRGNASEIMALSGLQANGRGVDSADDSLAALPAARELARSSGAVVAVTGVVDYIT
DGQRDWAVTGGDVLMTRVVGTGCALSAVVAAFCSLPGDRLDNVATACRVMSLCGERATRR
AAGPGSFTPAFLDALYQLRPEELQ