Protein Info for IAI46_17570 in Serratia liquefaciens MT49

Annotation: cyclic beta 1-2 glucan synthetase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 200 400 600 800 1000 1200 1400 1600 1800 2000 2200 2400 2600 2880 transmembrane" amino acids 422 to 442 (21 residues), see Phobius details amino acids 449 to 472 (24 residues), see Phobius details amino acids 830 to 847 (18 residues), see Phobius details amino acids 853 to 870 (18 residues), see Phobius details amino acids 886 to 905 (20 residues), see Phobius details amino acids 911 to 927 (17 residues), see Phobius details amino acids 952 to 972 (21 residues), see Phobius details amino acids 978 to 998 (21 residues), see Phobius details amino acids 1523 to 1540 (18 residues), see Phobius details PF10091: Glycoamylase" amino acids 1339 to 1528 (190 residues), 61.5 bits, see alignment 1.3e-20 PF06165: Glyco_transf_36" amino acids 1594 to 1841 (248 residues), 274.6 bits, see alignment E=1.3e-85 amino acids 2110 to 2351 (242 residues), 259.9 bits, see alignment E=3.7e-81 PF17167: Glyco_hydro_36" amino acids 2382 to 2806 (425 residues), 396.8 bits, see alignment E=1.6e-122

Best Hits

Predicted SEED Role

"Cyclic beta-1,2-glucan synthase (EC 2.4.1.-)" (EC 2.4.1.-)

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.4.1.-

Use Curated BLAST to search for 2.4.1.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (2880 amino acids)

>IAI46_17570 cyclic beta 1-2 glucan synthetase (Serratia liquefaciens MT49)
MKEILINWLKKQRKNSKIKSLPLRRQKDAPDNSGGAIKAELFSVDQMERYGQRLARSHKL
ATRKTPYYLLKRLDDNERILAESCHQLSNGKKASMTPAGEWLLDNYYLIEEQIRVVRHHL
PKTFGRGLPQLAPPHNCPRIYDVAAEAIAHGDGHWDAESLTRYIAAYQKEVNLTLGELWA
LPGMLRLALIENLRRVSVEVAQAQQERNLADSWVTKMLESAENDPANLIVVIADMARSNP
PRTSAFVAELVRRLQGHGTMLALPLTWVEQRLAEVSLTSDELIHRFNQQLAVSQLSVSNS
ISGLRQLSEMDWAEFVETMSQVEQTLREDPAGVYPLMHFTTRDNYRHVIEMLARHCPHNE
VQVAQHVLNMARVAAEDPSSDPRRNHIGYYLVDDGRPELEQQLEVKLGRITQLRHALSQA
PLLSWLGSLSLITTAICAELLRHAYSTGISWGLVLLFFPMAIVVSQFVLNLLSEVTTRSR
TPQPLPRLDFSCGIPAEFRTLVAIPTLIDSKSGVDKLINALEVCYLGNAMKHLHFALLTD
FNDAPQQRHADDAALLDYACRQMEALNGRYPCEGPSHFFLFHRDREWNEKQGVWMGLERK
RGKLNALNDWLRNRGNAFCTQIGDGLEVLKNVKYVITLDSDTVLPRESAHQLIAAMAHPL
NQPQYDARQQRVVEGYAILQPRMAEEIPSYGQGRYAALCSSTPGNDPYTLMASDIYQDLF
GEGSFIGKGIYDVDVFSHSLKGTCPANLVLSHDLLEGCYARSGLLSDVLLYEQYPSNYLV
DVARRTRWIRGDWQLLNWLLPRVKTEDGTRTANPLSTLSRWKLFDNLRRSLAAPSLLLLL
FCGFVWLPNTRYWLGVFALILLLPTLLALVQDILRKPPRRPVLQHLLLALNGSLHRLAQI
GLRLATLPHEALYSLKAIAVTLWRLLISKRNLQEWTSYDQSKARQQVTLENFYRAMWINP
VAGAALLLFSFLHNPMALFITLPFATLWILSPFLLYYLSQEPQRSKTAINDEQRRFLRHT
SRQTWDFFNTFVNQQENWLPPDNYQEIPEPVVAHRTSPTNIGLSLLANLTAYDFGYLTLS
DALRRIELTLNTLDRLEHYRGHLYNWYDTRTLEPLNPRYISSVDSGNLAGHLLTLSAGLP
ALAHQPAIDPLRVLTGLGDSLQLLEQHWGDAAPKNLSKLRNHWEQAHHSHPAALLAELNA
MRNYSNGLQEPALNHDEETKRWAGALHQQLNELCAEWAQWFGWLSDGMPELEQVPSLHWL
ANPPGQLTLSPEQQNQLSAAGALAQERLTQLQSLQQRLEKMAQMDFNFLYDESTHLLTVG
FNCDQNKMDSSKYDLLASEIRLTNYVAIATNQVPQRSWFALGRLFTVIDHEPALMSWSGS
MFEYLMPQLVMPAYPDSLLVQMCHAAVERQIAWGKERGVPWGISESGYFGFDADQNYQYH
AFGVPGLGLRRGLGDDMVVAPYATVMALIVDPDAACNNLVTLEKNGAKGRYGFYEALDYT
TARLSRGQLYVIIRSYMAHHQGMSFLALSHLLLDAPMVARFAEYPAFQSARLLLQERVPD
AVELYSTRRHFETHEGTITPASFAAREFNRVDSPIPEVQLLSNANYHLMLTQAGGSYSRW
QNLALTRWREDATCDNWGAFCYLRDPQTGEVWSNTWQPIGGAAKGYSAVFNDAGAEFQRQ
QGSLSVKTQVVVSPEDDIELRRVTLVNRSKQPRTIEITSYAEVVLAPAGNDLAHPAFSNL
FVQTELLPDQDAILCHRRPREPKEKCPWLLHMMTVQGRTSQTSFETDRAKFIGRGRTPAN
PQALYQNTPLSNSAGPVIDPIIAIRQRVVLEPNVPLTLDIFYGVSEDRVSSLAMLEKYRD
RHLADRVFELAWSHSQVVLRQLNANEDDANLFNRLASAVVFPAQEMRAASSEIINNRRGQ
SGLWGYSISGDLPIVLLTVTDGENIELVRQLIQAHNYWRLKGLQVDLVILNEDIGGYRQD
LQNQIMGLIAAGMESTQTDKPGGIFVRTSEHMSPEDHRLLLSVARIYLDDRRGGLTEQLN
QRLQLPQILQQPLSPVTASSKLATVDNLPRNLHSPQLPDIAALQFYNGLGGFSENGREYV
IAMNESKITPAPWSNVMANPMFGSVVSESGQAYTWYENAHEYRLTPWDNDPICDRSGEAF
YLRDEESGHFWSPTPLPARGRGHYLTRHGFGYSVFDHRESGIDSQFTLLVAKDAPVKLFL
LTLTNTSGRTRKLSATGYVEFILSDLRQKSAMHIVTQAASSENGCGILATNHYGGNGSDR
TAFFGVSGAHCSLTGDRREFIGRNGSLTNPAVLKLRRLSDKVGAGMDPCGAVQSAISLID
GDQRSFVFALGLGQNAEEAEALLHKYLQEDNLQDELQQVAAHWDGILNKVQIGTPQPAVD
LLANGWLLYQTLACRIQARSGYYQSGGAFGFRDQLQDTLALTHAAPERLREQILLCASRQ
FVEGDVQHWWHPPQGNGVRTRCSDDYLWLPLAICHYLDATDDQSILDEQVGYLEARKLAP
GEESSYEQPAQSVTQETLYQHGVRALKHGLNFGEHGLPLMGAGDWNDGMNMVGLEGRGES
VWLGFFLFHILQRYGKLATTRHDDELATLCRQQAETLRNNLRDHAWDGEWYRRGYFDSGE
PLGSHQSAECRIDAIAQSWSVLSGAGDEPRSLQAMQSLDKHLVDNQAGLIKLLTPPFDGN
GPNPGYIRGYLPGVRENGGQYTHGAVWAVMAFAEMGNIERAWELMALINPINHSLDSTAA
ERYKVEPYVVTADIYAVAPHVGRGGWSWYTGSAGWMYRLILESLLGLKRHGDRLSVNTRL
PADWPQVTLNYREGSSEYRLVVRQGQGAAQVSVDGEKQSEAVITLVDDGKIHQVEVTLGQ