Protein Info for IAI46_17235 in Serratia liquefaciens MT49

Annotation: 1-phosphofructokinase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 313 TIGR03168: hexose kinase, 1-phosphofructokinase family" amino acids 5 to 308 (304 residues), 326.5 bits, see alignment E=1.3e-101 TIGR03828: 1-phosphofructokinase" amino acids 5 to 308 (304 residues), 331.4 bits, see alignment E=4.6e-103 PF00294: PfkB" amino acids 14 to 292 (279 residues), 228.3 bits, see alignment E=6.9e-72

Best Hits

Swiss-Prot: 92% identical to K1PF_SHIFL: 1-phosphofructokinase (fruK) from Shigella flexneri

KEGG orthology group: K00882, 1-phosphofructokinase [EC: 2.7.1.56] (inferred from 100% identity to spe:Spro_3229)

MetaCyc: 92% identical to 1-phosphofructokinase (Escherichia coli K-12 substr. MG1655)
1-phosphofructokinase. [EC: 2.7.1.56]

Predicted SEED Role

"1-phosphofructokinase (EC 2.7.1.56)" in subsystem Fructose utilization (EC 2.7.1.56)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.7.1.56

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (313 amino acids)

>IAI46_17235 1-phosphofructokinase (Serratia liquefaciens MT49)
MSRRVATITLNPAYDLVGFCPEIERGEVNLVKTAGLHAAGKGINVAKVLKDLGIDVTVGG
FLGKDNQDGFQLLFSDLGIANRFQVVPGRTRINVKLTEKDGEVTDFNFSGFEVSGQDWER
FVTDSLSWLGQFDMVAVSGSLPAGVDPDAFTDWMIRLRAQCPCIIFDSSREALVAGLKAA
PWLVKPNRRELEIWAGRPLPQLADVVEAAHALRDQGIAHVVISLGAEGALWVNASGAWIA
KPPACEVVSTVGAGDSMVGGLIYGLLMRESSEHTLRLATAVAALAVSQSNVGVTDRPQLA
AMMARVDLKPFNQ