Protein Info for IAI46_16880 in Serratia liquefaciens MT49

Annotation: ABC transporter ATP-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF00005: ABC_tran
  • amino acids 37 to 195 (159 residues), 109.2 bits, E=1.7e-34
  • amino acids 312 to 464 (153 residues), 121.4 bits, E=2.8e-38
• PF13304: AAA_21
  • amino acids 116 to 229 (114 residues), 33.8 bits, E=2.2e-11

Best Hits

KEGG orthology group: K02031, peptide/nickel transport system ATP-binding protein K02032, peptide/nickel transport system ATP-binding protein (inferred from 94% identity to spe:Spro_3154)

Predicted SEED Role

"ABC transporter ATP-binding protein"

Protein Sequence (558 amino acids)

>IAI46_16880 ABC transporter ATP-binding protein (Serratia liquefaciens MT49)
MSIQSALQRASATPPVLELEQVSIAYQGAAGNQRVVHQVSFAIQPGEVVALVGESGSGKT
TTAQAIIGLLTENGRLEQGAIRLNGTDISHWSSKRLDAVRGAQISLIPQDPSSSLNPVKT
IGDQVAEIINIHRRLPRKQLQQRVVALLTRVGLTHPELRARQYPHELSGGMKQRVLIAIA
IALQPALIIADEPTSALDVTVQKRILDLIDELRQEFGTAVLLVTHDLAVAAERADRLLVF
RHGRVQEQGVTAEVLRAPASDYTRRLFADVPSLSRAVVPQPGHRTQELAIQVNGLVKDFP
LAGSGGKTYRALDQVSFSVPGGTTHALVGESGSGKTTLARCLLGFQRPDAGQIIIDGVDF
TRLKGEALRQFRRRIQLVYQNPFGSLDPSQTLYQVIEEPLLNFEPLTQAERYRRVRDLFE
RVALPNELLSRKPRELSGGQRQRVAIARALVLQPRVLVLDEATSALDVTVQAQILRLLQD
LQQELGLTYLFISHDLATVRQISHSVSVLHRGVQVDSGATDELFVMPGSDYTRQLIEAIP
GRQLYAEQPQIEDAFYEQ