Protein Info for IAI46_16375 in Serratia liquefaciens MT49

Annotation: 2,3-dehydroadipyl-CoA hydratase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF00378: ECH_1
  • amino acids 10 to 256 (247 residues), 239 bits, E=5.5e-75
• PF16113: ECH_2
  • amino acids 16 to 179 (164 residues), 102.3 bits, E=4e-33

Best Hits

Swiss-Prot: 65% identical to PAAF_ECOLI: 2,3-dehydroadipyl-CoA hydratase (paaF) from Escherichia coli (strain K12)

KEGG orthology group: K01692, enoyl-CoA hydratase [EC: 4.2.1.17] (inferred from 88% identity to spe:Spro_3077)

MetaCyc: 58% identical to 2,3-dehydroadipyl-CoA hydratase (Pseudomonas sp. Y2)
Enoyl-CoA hydratase. [EC: 4.2.1.17]

Predicted SEED Role

"Phenylacetate degradation enoyl-CoA hydratase PaaA (EC 4.2.1.17)" (EC 4.2.1.17)

MetaCyc Pathways

• oleate β-oxidation (29/35 steps found)
• fatty acid β-oxidation I (generic) (6/7 steps found)
• superpathway of glyoxylate cycle and fatty acid degradation (11/14 steps found)
• benzoyl-CoA biosynthesis (3/3 steps found)
• phenylacetate degradation I (aerobic) (7/9 steps found)
• adipate biosynthesis (4/5 steps found)
• adipate degradation (4/5 steps found)
• superpathway of phenylethylamine degradation (8/11 steps found)
• fatty acid β-oxidation II (plant peroxisome) (3/5 steps found)
• fatty acid β-oxidation IV (unsaturated, even number) (3/5 steps found)
• methyl ketone biosynthesis (engineered) (3/6 steps found)
• valproate β-oxidation (5/9 steps found)
• benzoyl-CoA degradation I (aerobic) (3/7 steps found)
• fatty acid β-oxidation VI (mammalian peroxisome) (3/7 steps found)
• 2-methyl-branched fatty acid β-oxidation (8/14 steps found)
• benzoate biosynthesis III (CoA-dependent, non-β-oxidative) (1/5 steps found)
• (8E,10E)-dodeca-8,10-dienol biosynthesis (5/11 steps found)
• benzoate biosynthesis I (CoA-dependent, β-oxidative) (3/9 steps found)
• 3-phenylpropanoate degradation (3/10 steps found)
• (4Z,7Z,10Z,13Z,16Z)-docosapentaenoate biosynthesis (6-desaturase) (3/13 steps found)
• docosahexaenoate biosynthesis III (6-desaturase, mammals) (3/14 steps found)
• platensimycin biosynthesis (6/26 steps found)
• Spodoptera littoralis pheromone biosynthesis (3/22 steps found)

KEGG Metabolic Maps

• Benzoate degradation via CoA ligation
• Biosynthesis of plant hormones
• Biosynthesis of unsaturated fatty acids
• Butanoate metabolism
• Caprolactam degradation
• Fatty acid elongation in mitochondria
• Fatty acid metabolism
• Geraniol degradation
• Limonene and pinene degradation
• Lysine degradation
• Propanoate metabolism
• Tryptophan metabolism
• Valine, leucine and isoleucine degradation
• alpha-Linolenic acid metabolism
• beta-Alanine metabolism

Isozymes

Compare fitness of predicted isozymes for: 4.2.1.17

Use Curated BLAST to search for 4.2.1.17

Protein Sequence (257 amino acids)

>IAI46_16375 2,3-dehydroadipyl-CoA hydratase (Serratia liquefaciens MT49)
METPLILQHRQARVLTLELHRPQARNALNTPCLEQLVYLLEQADADTAIGAVVITGTTRF
FAAGADLHELQRQDLPATLTDRRPLLWQRLAQFSKPLLAAVNGYALGAGCELALACDIVI
CGESARFGLPEITLGLMPGAGGTQRLIRCVGKSFASQMVLSGEAINASRALQCGLVSEVC
VDALTLERAQQIAEHISRQAPLALRAAKQALKQAEETGLSQGLLIERQQFATLAATDDRR
EGIAAFFEKRTPNYQGR