Protein Info for IAI46_16170 in Serratia liquefaciens MT49

Annotation: 3-oxoadipate enol-lactonase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 256 transmembrane" amino acids 80 to 96 (17 residues), see Phobius details TIGR02427: 3-oxoadipate enol-lactonase" amino acids 3 to 250 (248 residues), 270.4 bits, see alignment E=7.1e-85 PF00561: Abhydrolase_1" amino acids 14 to 233 (220 residues), 60.4 bits, see alignment E=3.3e-20 PF12697: Abhydrolase_6" amino acids 29 to 239 (211 residues), 42.8 bits, see alignment E=1.6e-14 PF12146: Hydrolase_4" amino acids 39 to 223 (185 residues), 43.6 bits, see alignment E=3.3e-15

Best Hits

Swiss-Prot: 51% identical to ELH2_ACIAD: 3-oxoadipate enol-lactonase 2 (catD) from Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)

KEGG orthology group: K01055, 3-oxoadipate enol-lactonase [EC: 3.1.1.24] (inferred from 83% identity to spe:Spro_3040)

MetaCyc: 42% identical to subunit of 3-oxoadipate enol-lactone hydrolase (Pseudomonas putida)
3-oxoadipate enol-lactonase. [EC: 3.1.1.24]

Predicted SEED Role

"Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24)" in subsystem Catechol branch of beta-ketoadipate pathway or Chloroaromatic degradation pathway or Protocatechuate branch of beta-ketoadipate pathway (EC 3.1.1.24)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.1.1.24

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (256 amino acids)

>IAI46_16170 3-oxoadipate enol-lactonase (Serratia liquefaciens MT49)
MDIDYRLDGRAAAPLLVLSNSLGTTFDLWQPQLLALSEHFRVLRYNQRGHGATPLSTPRL
RLEDLGQDVIALLDYLDVPSAHFCGISMGGLTGLWLNRYHPQRITRMVVANTAARIGNAE
GWQQRAQQVRSQGLSSIAAASPARWFTEAFLQNHPEQVASLVAALAAGNPEGYAACCDAL
SVADLRADVVSMSRPMRVIAGDADPVTTVADAEFLVGNAPHAELQRLPASHISNLACPQL
FSHSVIEFLTEERSAG