Protein Info for IAI46_15530 in Serratia liquefaciens MT49

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 417 transmembrane" amino acids 6 to 26 (21 residues), see Phobius details amino acids 37 to 56 (20 residues), see Phobius details amino acids 97 to 124 (28 residues), see Phobius details amino acids 137 to 160 (24 residues), see Phobius details amino acids 180 to 204 (25 residues), see Phobius details amino acids 214 to 238 (25 residues), see Phobius details amino acids 267 to 287 (21 residues), see Phobius details amino acids 299 to 332 (34 residues), see Phobius details amino acids 344 to 366 (23 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 94% identity to spe:Spro_2884)

Predicted SEED Role

"FIG01056367: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (417 amino acids)

>IAI46_15530 hypothetical protein (Serratia liquefaciens MT49)
MRFERSTLIGSVLLLTVPLFALLHSIGTLRAGKKNSAAYVLIALCFFFFFIKIPPLADLY
RHFANYDAINSATRLSDVIQGKVDVVLYANFYIFKTLGIPFFIIPGLYVALSVYCYLSAL
NIVMLHSGKAFTARQFVLLHLAVLFLINPFIIAMGLRFGFSMAVMTLAMVLFCHKLNRPL
AAGLMLFAMLTHFSSMLLVGVFLCSRVMRLNRLLTVVFSAIAFLTAKFALPFIVSHITIS
GINSYSDVYTSGMYASDYLTSGNANGMINFLIVLFPALFLGVFMLANPMRNQAGDIKNYA
AWLVVFVFLCSSSLQAASRYASVASVFLLFYYVAHRGSFIRGRFNYFFLCFMLMATGYNL
IENLYVPRRPIMLGQMWQSFYKTPLLNLFYGEQEYEQYLQFINRDSGEWIGHEMDLG