Protein Info for IAI46_14950 in Serratia liquefaciens MT49

Annotation: SGNH/GDSL hydrolase family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 610 PF00657: Lipase_GDSL" amino acids 464 to 602 (139 residues), 41.1 bits, see alignment E=2.3e-14 PF13472: Lipase_GDSL_2" amino acids 466 to 597 (132 residues), 47.8 bits, see alignment E=2.5e-16

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (610 amino acids)

>IAI46_14950 SGNH/GDSL hydrolase family protein (Serratia liquefaciens MT49)
MALTNDKSSARSATIAENAAAEAKSYAVRAAMSEDFANQSQESAEAAASSAELAEEAKSS
SESAAGVSTSSAVDAATSAAEAALLSSYASTASNVYLTVEDAQLKIDAGTIPLDALFNVR
GADSSFVDRYQNVAGVATFTGESDPSKDFVTSKVDSVSANNSRVPLYQDDDGKVPVWLTN
GDLDARGVADGIVSSLAGRVIGKGTEQFTAKSVKVPLWYDEAGKVPVWLENGNLAARGIS
SALLNVIKTLISPSFQMREAPLAATKPVSTDGRTLFKFKSKLGRVLNNEVVTPRIMLTGD
SWTEYVAIPQAVYNVCSSKYAASNSSYISVNGQFMLNSATFAKSAGWVLYDASLVSVGPT
NGCGPDGQSISTTAADQTINITSQQCTQVNILCQNLNGTFRYRIDGGSWVTITGTNTGVM
QRVTTGTLSDTTHSIDIDTTGNTGTVAIHGLWCPRAARGVEIQKCGNAGITGSGITNYYT
QIQQYANFMQPDLIFIILGTNDFRLSKTILSYTDGMRNMIAQYKAAYAETGIVLVSPARC
NATGALPTTDFRDAMAALAMELGVEFFNFHDDWDVWSVMNSYGVWVDSLHLNDSGAAALA
KSLDKHFLSQ