Protein Info for IAI46_13095 in Serratia liquefaciens MT49

Annotation: ABC transporter ATP-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF00005: ABC_tran
  • amino acids 20 to 181 (162 residues), 113.9 bits, E=9.3e-37
• PF12399: BCA_ABC_TP_C
  • amino acids 229 to 255 (27 residues), 41.7 bits, see alignment (E = 6.9e-15)

Best Hits

Swiss-Prot: 45% identical to LIVG_SALTI: High-affinity branched-chain amino acid transport ATP-binding protein LivG (livG) from Salmonella typhi

KEGG orthology group: K01995, branched-chain amino acid transport system ATP-binding protein (inferred from 94% identity to spe:Spro_2551)

MetaCyc: 45% identical to branched chain amino acid/phenylalanine ABC transporter ATP binding subunit LivG (Escherichia coli K-12 substr. MG1655)
ABC-15-RXN [EC: 7.4.2.2]; 7.4.2.2 [EC: 7.4.2.2]; 7.4.2.2 [EC: 7.4.2.2]; 7.4.2.2 [EC: 7.4.2.2]

Predicted SEED Role

"Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1)" in subsystem ABC transporter branched-chain amino acid (TC 3.A.1.4.1) (TC 3.A.1.4.1)

Isozymes

No predicted isozymes

Use Curated BLAST to search for 7.4.2.2

Protein Sequence (256 amino acids)

>IAI46_13095 ABC transporter ATP-binding protein (Serratia liquefaciens MT49)
MTPLLTLSHVSKRFGGLTAVDNVSISIRQGEIYGLIGPNGAGKTTCFNLITGLYRADSGE
FRLHDQRYKPQAIDKVAQAGIARTFQNLRLFNEMSVLENVMVGCHLRTRNGLWAAISRHR
RARQEEQATREKSHALLDYVGISQFAHYRAGDLSYGHQRRLEIARALATEPKLLALDEPA
AGMNAAEKVALRDLLLRIRDSGTTLLLIEHDVKLVMGLCDRMTVLDYGKVIAEGEPAQVR
REPAVIRAYLGGAAHV