Protein Info for IAI46_11725 in Serratia liquefaciens MT49

Annotation: GNAT family N-acetyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 173 PF13302: Acetyltransf_3" amino acids 15 to 150 (136 residues), 82.3 bits, see alignment E=8.3e-27 PF00583: Acetyltransf_1" amino acids 45 to 150 (106 residues), 39.2 bits, see alignment E=1.2e-13

Best Hits

KEGG orthology group: None (inferred from 94% identity to spe:Spro_2291)

Predicted SEED Role

"FIG01055303: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (173 amino acids)

>IAI46_11725 GNAT family N-acetyltransferase (Serratia liquefaciens MT49)
MIHSDLSQCRVNTDRLLIAPFTAADADDVYQAITPTLTRFMNFEPEESPEAFANVWQTWL
PLIREGEELIFVARLRDSKEFVGMGGLHDLHNTTPELGIWVKESLHGNGYGREIVHAMAV
WASERYRPRHFIYPVAEQNTPSRRIAESLGGVVAGRRENTKYDCVVYHVPPQL