Protein Info for IAI46_11700 in Serratia liquefaciens MT49

Annotation: MFS transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 495 transmembrane" amino acids 15 to 38 (24 residues), see Phobius details amino acids 48 to 69 (22 residues), see Phobius details amino acids 81 to 104 (24 residues), see Phobius details amino acids 110 to 131 (22 residues), see Phobius details amino acids 140 to 162 (23 residues), see Phobius details amino acids 168 to 188 (21 residues), see Phobius details amino acids 200 to 219 (20 residues), see Phobius details amino acids 225 to 244 (20 residues), see Phobius details amino acids 264 to 287 (24 residues), see Phobius details amino acids 302 to 323 (22 residues), see Phobius details amino acids 331 to 349 (19 residues), see Phobius details amino acids 356 to 379 (24 residues), see Phobius details amino acids 391 to 415 (25 residues), see Phobius details amino acids 458 to 479 (22 residues), see Phobius details PF07690: MFS_1" amino acids 21 to 408 (388 residues), 182.5 bits, see alignment E=1.1e-57 PF00083: Sugar_tr" amino acids 49 to 184 (136 residues), 46.6 bits, see alignment E=2.4e-16

Best Hits

KEGG orthology group: None (inferred from 94% identity to spe:Spro_2286)

Predicted SEED Role

"Multidrug resistance protein B"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (495 amino acids)

>IAI46_11700 MFS transporter (Serratia liquefaciens MT49)
MTNNEAPAPLPHRPLILIACMLAMFMSAIEATIVATAMPTIIGDLGGFSLLGWVFAVYLL
AQAITIPIYGRLADFLGRKRVFFFGATLFLLGSVLCGFSPNMYWLIGFRLLQGLGAGAIM
PIATTIIGDVYSATERPKVMGYLSSVWGVSAIVGPLLGAFIVQHLPWALVFWVNLPIGLL
AMFFLGRYLPSHQQLRKHALDLAGTAWLTLFVSALLLSLLQAENLGWWVLPLLGLAAVAL
MLLVRQERRAPEPLFPLALWQSRVIVAGNIGGLVIGAAMMGISAFLPTFIQGVMGGTPLE
AGTTLALMSIGWPLASTFSGRLMLMTSYRTTALLGALLLVAGGLILLLMQPSGGLLWGRV
AAFMIGAGMGLCNTTFLVSVQNAAHHSIRGIATACTVFTRMMGSAIGTAILGATLNINLQ
VRLPQTTDPVQQLMEPATRGAMGSEMLAEMTQQVAASLHWVFLVSAIISLLALAAAMLIP
ARHRPQGEGEEAEQA