Protein Info for IAI46_07780 in Serratia liquefaciens MT49

Annotation: glutathione S-transferase N-terminal domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 235 transmembrane" amino acids 119 to 136 (18 residues), see Phobius details PF02798: GST_N" amino acids 21 to 99 (79 residues), 53.4 bits, see alignment E=8.3e-18 PF13417: GST_N_3" amino acids 23 to 102 (80 residues), 40.3 bits, see alignment E=1e-13 PF13409: GST_N_2" amino acids 29 to 99 (71 residues), 49.7 bits, see alignment E=1.4e-16 PF00043: GST_C" amino acids 143 to 222 (80 residues), 32.7 bits, see alignment E=2.1e-11 PF14497: GST_C_3" amino acids 147 to 225 (79 residues), 25.9 bits, see alignment E=2.8e-09 PF13410: GST_C_2" amino acids 151 to 217 (67 residues), 29.7 bits, see alignment E=1.8e-10

Best Hits

KEGG orthology group: None (inferred from 95% identity to srr:SerAS9_1500)

Predicted SEED Role

"Glutathione S-transferase (EC 2.5.1.18)" in subsystem Glutathione: Non-redox reactions (EC 2.5.1.18)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.5.1.18

Use Curated BLAST to search for 2.5.1.18

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (235 amino acids)

>IAI46_07780 glutathione S-transferase N-terminal domain-containing protein (Serratia liquefaciens MT49)
MLDQTQFPITKLWPAQHPERLQLYSLPTPNGVKVSIMLEEIGLPYEAHLIDIGKNETWTP
EFLSLNPNGKIPAIIDPDGPGGKPLPLFESGAILLYLAEKSGKFLPQDPALRYETIQWVF
FQMAAVGPMFGQLGFFHRFAGREYEDKRPLERYKNESKRLLGVLESRLEGRDWIMGQDYT
IADISLLGWVRNLIGFYEAREIVDFDSFPRVGQWLERGLARPAVQRGVNIPARSE