Protein Info for IAI46_05780 in Serratia liquefaciens MT49

Annotation: fumarylacetoacetate hydrolase family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 256 PF01557: FAA_hydrolase" amino acids 73 to 247 (175 residues), 44.7 bits, see alignment E=6.8e-16

Best Hits

Swiss-Prot: 62% identical to AMNF_PSESP: 2-oxopent-4-enoate hydratase (amnF) from Pseudomonas sp.

KEGG orthology group: None (inferred from 66% identity to pol:Bpro_5134)

MetaCyc: 59% identical to 2-oxopent-4-enoate hydratase (Pseudomonas putida F1)
2-oxopent-4-enoate hydratase. [EC: 4.2.1.80]

Predicted SEED Role

"2-keto-4-pentenoate hydratase (EC 4.2.1.80)" (EC 4.2.1.80)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 4.2.1.80

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (256 amino acids)

>IAI46_05780 fumarylacetoacetate hydrolase family protein (Serratia liquefaciens MT49)
MLRQAAESGRPCSPVRHLVGSQDIDAAYAVQRVNNQERIQKGHRPVGSKIGLTSAAVQRQ
LGVNQPDFGQLFADMALCDGEEIAAGRLIQPKVEAEIALVLERDLPHEKNTLADLIRATA
YLLPALEVVDSRIAGWDISLADTIADNASCGLFVLGNRPVLLKDVDLLGCGMVLERAGEP
VSVGAGAACLGNPLLAALWLADTLAQRGNALRAGDIILTGALGPMVAACAGDVFSARIEG
LGQVSGRFAPAAGGDQ