Protein Info for IAI46_04265 in Serratia liquefaciens MT49

Annotation: amino acid ABC transporter ATP-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF00005: ABC_tran
  • amino acids 19 to 166 (148 residues), 130.6 bits, E=1.4e-41

Best Hits

Swiss-Prot: 53% identical to GLNQ_BACSU: Glutamine transport ATP-binding protein GlnQ (glnQ) from Bacillus subtilis (strain 168)

KEGG orthology group: K02028, polar amino acid transport system ATP-binding protein [EC: 3.6.3.21] (inferred from 99% identity to spe:Spro_0935)

MetaCyc: 53% identical to L-glutamine ABC transporter ATP binding subunit (Escherichia coli K-12 substr. MG1655)
ABC-12-RXN [EC: 7.4.2.1]

Predicted SEED Role

"Glutamate transport ATP-binding protein"

Isozymes

Compare fitness of predicted isozymes for: 3.6.3.21

Use Curated BLAST to search for 3.6.3.21 or 7.4.2.1

Protein Sequence (247 amino acids)

>IAI46_04265 amino acid ABC transporter ATP-binding protein (Serratia liquefaciens MT49)
MPLITINQVQKYYGQNHVLKGVDLDIDMGQVISIIGRSGSGKSTLLRCINGLEGYQEGSI
KLGGMTITDRDSQAREISRSIGMVFQNFNLFPHMTALENVMLAPRRVLKKSPAECRELAE
EMLNKVGLGERMHYSPANLSGGQQQRVAIARALAMNPKVLLCDEITSALDPELVGEVLKV
LEQLAKEGMTLILVTHEMNFAREVGDRVVFMHQGKVWEQGDSRTLFANPQTQELKQFIAS
VRGLSEA