Protein Info for IAI46_01190 in Serratia liquefaciens MT49

Annotation: type I pantothenate kinase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 316 TIGR00554: pantothenate kinase" amino acids 10 to 316 (307 residues), 552 bits, see alignment E=1.9e-170 PF00485: PRK" amino acids 90 to 244 (155 residues), 55.3 bits, see alignment E=4e-19

Best Hits

Swiss-Prot: 99% identical to COAA_SERP5: Pantothenate kinase (coaA) from Serratia proteamaculans (strain 568)

KEGG orthology group: K00867, type I pantothenate kinase [EC: 2.7.1.33] (inferred from 99% identity to spe:Spro_0269)

MetaCyc: 83% identical to pantothenate kinase (Escherichia coli K-12 substr. MG1655)
Pantetheine kinase. [EC: 2.7.1.34]; Pantothenate kinase. [EC: 2.7.1.34, 2.7.1.33]

Predicted SEED Role

"Pantothenate kinase (EC 2.7.1.33)" in subsystem Coenzyme A Biosynthesis (EC 2.7.1.33)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.7.1.33 or 2.7.1.34

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (316 amino acids)

>IAI46_01190 type I pantothenate kinase (Serratia liquefaciens MT49)
MIKRDQSLATPYLQFDRTQWAALRDSVPLTLSEEEIVKLKGINEDLSLEEVAQIYLPLSR
LLNFYISSNLRRQAVLEQFLGTDGQKIPYVIGIAGSVAVGKSTTARLLQALLSSWPEHRS
VELITTDGFLHPNKVLNERGLMKKKGFPQSYDMHSLVKFVSEVKSGAKRVTAPVYSHLIY
DVVPEGNKVIEQPDILILEGLNVLQSGMDYPHDPHRVFVSDFVDFSIYVDAPEELLQSWY
INRFLKFRQGAFSNPDSYFHNYSKLPEPEAVNIATQLWNEINGLNLQENILPTRERASLI
MTKSANHAVESVRLRK