Protein Info for IAI46_00825 in Serratia liquefaciens MT49

Annotation: GNAT family N-acetyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 144 PF00583: Acetyltransf_1" amino acids 12 to 108 (97 residues), 36.7 bits, see alignment E=9.6e-13 PF13673: Acetyltransf_10" amino acids 18 to 107 (90 residues), 24.6 bits, see alignment E=4.2e-09 PF13480: Acetyltransf_6" amino acids 44 to 102 (59 residues), 29.2 bits, see alignment E=1.9e-10 PF13508: Acetyltransf_7" amino acids 44 to 104 (61 residues), 27.6 bits, see alignment E=6.1e-10

Best Hits

KEGG orthology group: None (inferred from 80% identity to srs:SerAS12_0166)

Predicted SEED Role

"Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1)" (TC 3.A.5.1.1)

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (144 amino acids)

>IAI46_00825 GNAT family N-acetyltransferase (Serratia liquefaciens MT49)
MTVTTRHATLEEIHRLYQQIPEFGNLHNLNDLQQRIGSLPMAALIAEVDGQAAGFKLGYQ
QQDRVFYSWLGAVLPAYRRHGVAMALLAEQENWARAQGYHQLRVKTRNQFRAMLMMLINN
HYQIVQLEKKGEVADYRLLLEKTL