Protein Info for IAI46_00760 in Serratia liquefaciens MT49
Annotation: thioesterase family protein
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 68% identical to YIGI_ECOLI: Uncharacterized protein YigI (yigI) from Escherichia coli (strain K12)
KEGG orthology group: None (inferred from 99% identity to spe:Spro_0191)MetaCyc: 68% identical to acyl-CoA thioesterase YigI (Escherichia coli K-12 substr. MG1655)
Acyl-CoA hydrolase. [EC: 3.1.2.20]; Palmitoyl-CoA hydrolase. [EC: 3.1.2.20, 3.1.2.2]; 3.1.2.2 [EC: 3.1.2.20, 3.1.2.2]
Predicted SEED Role
"putative protein PaaI, possibly involved in aromatic compounds catabolism"
MetaCyc Pathways
- acyl-CoA hydrolysis (1/1 steps found)
- bacterial bioluminescence (4/8 steps found)
- stearate biosynthesis I (animals) (1/6 steps found)
- sporopollenin precursors biosynthesis (5/18 steps found)
- firefly bioluminescence (2/14 steps found)
- cutin biosynthesis (2/16 steps found)
- jasmonic acid biosynthesis (4/19 steps found)
- suberin monomers biosynthesis (3/20 steps found)
KEGG Metabolic Maps
Isozymes
No predicted isozymesUse Curated BLAST to search for 3.1.2.2 or 3.1.2.20
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (156 amino acids)
>IAI46_00760 thioesterase family protein (Serratia liquefaciens MT49) MSTTPLTLEAARQKIGEIFVYHMPFNRELGLELRRFDDDYVELSFTNQPKLVGNAAQKIL HGGVIASVLDVAAGLACAGSVLMRLDPLIEEEVASRLSRMGTIDLRVDYLRPGRGEHFIA AASVLRSGNKVAVARVELHNHDGLHIASATATYLVG