Protein Info for HUW76_07570 in Fusobacterium nucleatum SB010

Annotation: acetyl-CoA C-acetyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 402 transmembrane" amino acids 381 to 398 (18 residues), see Phobius details PF00108: Thiolase_N" amino acids 4 to 263 (260 residues), 319.5 bits, see alignment E=1.7e-99 TIGR01930: acetyl-CoA C-acyltransferase" amino acids 6 to 399 (394 residues), 467 bits, see alignment E=2.4e-144 PF02803: Thiolase_C" amino acids 270 to 399 (130 residues), 149.1 bits, see alignment E=4.8e-48

Best Hits

Swiss-Prot: 54% identical to THIL_CHRVO: Acetyl-CoA acetyltransferase (phaA) from Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757)

KEGG orthology group: K00626, acetyl-CoA C-acetyltransferase [EC: 2.3.1.9] (inferred from 96% identity to fnu:FN0495)

MetaCyc: 55% identical to acetyl-CoA C-acetyltransferase (Pseudomonas simiae)
Acetyl-CoA C-acyltransferase. [EC: 2.3.1.16, 2.3.1.9]

Predicted SEED Role

"3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)" (EC 2.3.1.16, EC 2.3.1.9)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.3.1.16 or 2.3.1.9

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (402 amino acids)

>HUW76_07570 acetyl-CoA C-acetyltransferase (Fusobacterium nucleatum SB010)
MSKVYVVAAKRSAIGSFLGSLAPLKPGDLGAQIVKNILEETKVDPANIDEVIVGNVLSAG
QAQGVGRQVSIRAGIPYEVPAYSVNIICGSGMKSIITAFSNIKAGEANLVIAGGTESMSG
AGFILPGAIRGGHKMADLTMKDHMILDALTDAYHNIHMGITAENIAEKYGITREEQDAFA
LESQKKAIAAVDSGRFKDEIVPVIIPNKKGDITFDTDEYPNRKTDAEKLAKLKPAFKKDG
SVTAGNASGLNDGASFVMLASEEAVKKYNLKPLVEIIATGTGGVDPLIMGMGPVPAIRKA
FNKTDLKLKDMELIELNEAFAAQSLGVIKELCKEHGVTPEWIKERTNVNGGAIALGHPVG
ASGNRITVTLIHEMKKRGVEYGLASLCIGGGMGTALILKNVK