Protein Info for HUW76_05965 in Fusobacterium nucleatum SB010

Annotation: DUF1643 domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 432 PF00149: Metallophos" amino acids 22 to 205 (184 residues), 56 bits, see alignment E=7.7e-19 PF07799: DUF1643" amino acids 251 to 361 (111 residues), 57.7 bits, see alignment E=1.4e-19

Best Hits

Predicted SEED Role

"Serine/threonine protein phosphatase( EC:3.1.3.16 )"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (432 amino acids)

>HUW76_05965 DUF1643 domain-containing protein (Fusobacterium nucleatum SB010)
MNRGIIIRKKQIKYIDENDYNRIFVISDLHGYYELFLKFIEKVNLQKDDLLINLGDTCDR
GTQSYELYLKYDEMIKQGYNILHILGNHEDMLLTTVYTLDFDRLEHWFINGGEKTIESFK
RVTGLSTGHFFDLEKNKFLIDFLSSFPTLIVSNKTIFTHAAYNPDLPPEKQEEYFLIWNR
ENFWDRNKTGKAIYFGHTPSKKENHTMVYYPNNCTCIDLGTYRYNKMVGIEIKSKEEYYI
EMLYQGDGNTRFVLGEVTGDNPLICFGINPSNAKIIDNKLQTDKTIEKIRHIADMENYDG
WIMLNLYAQVTSEPNNLDKVFNNNLHSKNIDEIEKILNRFPNSDILACWGNLIEKRRYLK
YCLKGLKIDNNIADYNFPDEIKDIKGIISLTKNRKWFYRGMITKKGHPNHQVRTKNSARL
EEFNIKKYIKNL