Protein Info for HUW76_03125 in Fusobacterium nucleatum SB010

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 124 transmembrane" amino acids 7 to 25 (19 residues), see Phobius details amino acids 30 to 49 (20 residues), see Phobius details amino acids 69 to 89 (21 residues), see Phobius details amino acids 95 to 116 (22 residues), see Phobius details PF03899: ATP-synt_I" amino acids 8 to 96 (89 residues), 26.9 bits, see alignment E=2.6e-10

Best Hits

KEGG orthology group: K02116, ATP synthase protein I (inferred from 77% identity to fnu:FN0365)

Predicted SEED Role

"ATP synthase protein I, sodium ion specific"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (124 amino acids)

>HUW76_03125 hypothetical protein (Fusobacterium nucleatum SB010)
MEDIKNLFKKTIIVTIVCFLLGLVFQNKYLLFGISGGCAISVIALYMLSVDTKAIIYSKD
IKTAKRIAYIGYAKRYFLHFIFLAVLLYFFKDFKIFLSGFIGTLNVKLTIYTMNALERIK
KYLK