Protein Info for HUW76_02240 in Fusobacterium nucleatum SB010

Annotation: acyl carrier protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 25 50 75 TIGR00517: acyl carrier protein" amino acids 2 to 73 (72 residues), 115.6 bits, see alignment E=3.7e-38 PF00550: PP-binding" amino acids 3 to 70 (68 residues), 68.4 bits, see alignment E=2.5e-23

Best Hits

Swiss-Prot: 99% identical to ACP_FUSNN: Acyl carrier protein (acpP) from Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131)

KEGG orthology group: K02078, acyl carrier protein (inferred from 99% identity to fnu:FN0150)

MetaCyc: 61% identical to acyl carrier protein (Escherichia coli K-12 substr. MG1655)

Predicted SEED Role

"Acyl carrier protein" in subsystem Fatty Acid Biosynthesis FASII or Glycerolipid and Glycerophospholipid Metabolism in Bacteria or mycolic acid synthesis

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (75 amino acids)

>HUW76_02240 acyl carrier protein (Fusobacterium nucleatum SB010)
MLDKVKEIIVEQLGVDADQIKPESNFVDDLGADSLDTVELIMSFEEEFGVEIPDTEAEKI
KTVQDVINYIEAHKK