Protein Info for HMPREF1181_RS16360 in Bacteroides stercoris CC31F

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 357 signal peptide" amino acids 1 to 21 (21 residues), see Phobius details transmembrane" amino acids 154 to 175 (22 residues), see Phobius details amino acids 328 to 350 (23 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 86% identity to bhl:Bache_2282)

Predicted SEED Role

"FIG00936810: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (357 amino acids)

>HMPREF1181_RS16360 hypothetical protein (Bacteroides stercoris CC31F)
MKRYLFLITLLTALTGRVIAQSVTVDATIDSLQILIGEQAKIKLQVSLDTDKRAILPAYT
DTLVRGVEIVDIAKPDTQMLNDGRRSLITQEYTVTSFDSALYYLPPMEVLVDNKAYRSKA
LALKVYSMPVDTLHPDQFFGPKPVMKAPFAWEDWYMSIACAVLFVPFLLLLIYLVKRIRD
NKPIIRKVKVEPKLPPHQLAMQEIERIKGEKVWQKGQSKEYYTELTDAIRTYIKDRFGFN
ALEMTSSEIIDKLLEMNDKNAISDLRILFQTADLVKFAKHNPLMNENDANLINAIDFINE
TKEKEDENAKPQPTEITIIEKRSLRTKILLGAGIVALTAALVGSLIYIGLELYNYFA