Gene info for HMPREF1181_RS12405 in Bacteroides stercoris CC31F

Annotation: carboxymuconolactone decarboxylase family protein
Type 7: Pseudogene derived from a protein-coding gene
Located on scaffold NZ_KE340313, - strand, nucleotides 480,770 to 480,961
See nucleotide sequence around HMPREF1181_RS12405 or for all of scaffold NZ_KE340313

Nearby Genes

500 ntHMPREF1181_RS12380 and HMPREF1181_RS12385 are separated by 31 nucleotidesHMPREF1181_RS12385 and HMPREF1181_RS12390 overlap by 8 nucleotidesHMPREF1181_RS12390 and HMPREF1181_RS12395 are separated by 55 nucleotidesHMPREF1181_RS12395 and HMPREF1181_RS12400 are separated by 336 nucleotidesHMPREF1181_RS12400 and HMPREF1181_RS12405 are separated by 87 nucleotidesHMPREF1181_RS12405 and HMPREF1181_RS12410 are separated by 272 nucleotidesHMPREF1181_RS12410 and HMPREF1181_RS12415 are separated by 53 nucleotidesHMPREF1181_RS12415 and HMPREF1181_RS12420 are separated by 363 nucleotidesHMPREF1181_RS12420 and HMPREF1181_RS12425 are separated by 93 nucleotidesHMPREF1181_RS12425 and HMPREF1181_RS12430 overlap by 4 nucleotides HMPREF1181_RS12380: HMPREF1181_RS12380 - TolC family protein, at 475,712 to 476,995 _RS12380 HMPREF1181_RS12385: HMPREF1181_RS12385 - histidine kinase, at 477,027 to 478,052 _RS12385 HMPREF1181_RS12390: HMPREF1181_RS12390 - response regulator transcription factor, at 478,045 to 478,818 _RS12390 HMPREF1181_RS12395: HMPREF1181_RS12395 - DMT family transporter, at 478,874 to 479,785 _RS12395 HMPREF1181_RS12400: HMPREF1181_RS12400 - flavodoxin, at 480,122 to 480,682 _RS12400 HMPREF1181_RS12405: HMPREF1181_RS12405 - carboxymuconolactone decarboxylase family protein, at 480,770 to 480,961 _RS12405 HMPREF1181_RS12410: HMPREF1181_RS12410 - MATE family efflux transporter, at 481,234 to 482,604 _RS12410 HMPREF1181_RS12415: HMPREF1181_RS12415 - SDR family oxidoreductase, at 482,658 to 483,419 _RS12415 HMPREF1181_RS12420: HMPREF1181_RS12420 - polyamine ABC transporter ATP-binding protein, at 483,783 to 485,165 _RS12420 HMPREF1181_RS12425: HMPREF1181_RS12425 - ABC transporter permease, at 485,259 to 486,059 _RS12425 HMPREF1181_RS12430: HMPREF1181_RS12430 - ABC transporter permease, at 486,056 to 486,847 _RS12430
Locus Name Description Strand Phenotype
HMPREF1181_RS12380 HMPREF1181_RS12380 TolC family protein + insig.
HMPREF1181_RS12385 HMPREF1181_RS12385 histidine kinase + insig.
HMPREF1181_RS12390 HMPREF1181_RS12390 response regulator transcription factor + insig.
HMPREF1181_RS12395 HMPREF1181_RS12395 DMT family transporter + insig.
HMPREF1181_RS12400 HMPREF1181_RS12400 flavodoxin - insig.
HMPREF1181_RS12405 HMPREF1181_RS12405 carboxymuconolactone decarboxylase family protein - no data
HMPREF1181_RS12410 HMPREF1181_RS12410 MATE family efflux transporter - insig.
HMPREF1181_RS12415 HMPREF1181_RS12415 SDR family oxidoreductase - insig.
HMPREF1181_RS12420 HMPREF1181_RS12420 polyamine ABC transporter ATP-binding protein + cofit
HMPREF1181_RS12425 HMPREF1181_RS12425 ABC transporter permease + insig.
HMPREF1181_RS12430 HMPREF1181_RS12430 ABC transporter permease + insig.

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