Protein Info for HMPREF1181_RS10145 in Bacteroides stercoris CC31F

Annotation: MFS transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 393 signal peptide" amino acids 1 to 29 (29 residues), see Phobius details transmembrane" amino acids 51 to 72 (22 residues), see Phobius details amino acids 82 to 100 (19 residues), see Phobius details amino acids 105 to 127 (23 residues), see Phobius details amino acids 139 to 159 (21 residues), see Phobius details amino acids 168 to 188 (21 residues), see Phobius details amino acids 216 to 240 (25 residues), see Phobius details amino acids 252 to 274 (23 residues), see Phobius details amino acids 281 to 298 (18 residues), see Phobius details amino acids 304 to 323 (20 residues), see Phobius details amino acids 343 to 362 (20 residues), see Phobius details amino acids 368 to 388 (21 residues), see Phobius details PF07690: MFS_1" amino acids 20 to 356 (337 residues), 98.4 bits, see alignment E=2.2e-32

Best Hits

KEGG orthology group: None (inferred from 52% identity to bfr:BF1413)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (393 amino acids)

>HMPREF1181_RS10145 MFS transporter (Bacteroides stercoris CC31F)
MKYELRENQGIPAPLLALMAAATGLSVANCYYNQPLLGSMAKDFAVNDFSASMVATLTQI
GYVTGLVFVIPLGDLVSRKKLILTNYIVSACALLAISLAPNIYWVWGASLLAGASSVMPQ
FFIPLVSYHSAPAHKVRNVGIIQSCLLIGILGSRVFSGFLADVWGWRSVYFVACVFMLGC
FLMIYKMLPVLSARSQESYAGLMKSLLRLLSQYPYLRIASLRAALAYGSFFALWSCLAFR
MKQEPFFASDDIIGALGLCGLAGASTVVFISSYIQKYGARFFSIAGGCVVLTAWLLAFLG
NDSYLWMIVAILLIDAGMQCIHLSNQTSVVALDASAINRVNTVYMTIYFLGGSAGTFVSG
LSWQHYGWAGVAWTGIAFTVASLLVNYFKPQTT