Protein Info for HMPREF1181_RS06750 in Bacteroides stercoris CC31F

Annotation: sugar MFS transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 421 transmembrane" amino acids 7 to 29 (23 residues), see Phobius details amino acids 41 to 64 (24 residues), see Phobius details amino acids 74 to 92 (19 residues), see Phobius details amino acids 98 to 119 (22 residues), see Phobius details amino acids 130 to 153 (24 residues), see Phobius details amino acids 186 to 205 (20 residues), see Phobius details amino acids 232 to 254 (23 residues), see Phobius details amino acids 274 to 293 (20 residues), see Phobius details amino acids 300 to 318 (19 residues), see Phobius details amino acids 324 to 346 (23 residues), see Phobius details amino acids 356 to 377 (22 residues), see Phobius details amino acids 386 to 406 (21 residues), see Phobius details PF07690: MFS_1" amino acids 16 to 360 (345 residues), 113.6 bits, see alignment E=5e-37

Best Hits

KEGG orthology group: None (inferred from 89% identity to bth:BT_4653)

Predicted SEED Role

"Hypothetical sugar permease"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (421 amino acids)

>HMPREF1181_RS06750 sugar MFS transporter (Bacteroides stercoris CC31F)
MKKNLGMLALIMAFWFTISFITNILGPLIPDIIHNFNLSDLAMAGFIPTSFFIAYAIMSV
PAGLMIDRFGEKPVLFLGFLMPFIGTTLFACIHTYPMLLASSFIIGLGMAMLQTVLNPLQ
RVVGGEENYAFVAEVAQFVFGIASFLSPLVYTYLIHELNPDIYTEGRNFFIDLLAGITPP
DLPWVSLYWVFTLLLLVMLVAVGLSRFPKIELKEDEKGGSKDSYLALFRQKYVWLFFLGI
FCYVSTEQGTSIFMSTFLEQYHGVNPQVEGAKAVSYFWGLMTAGCLVGMVLLKLIDSKRL
LQLSGGLTIILLLTALFGSKEASIIAFPAIGFSISMMYSIVFSLALNSASQHHGSFAGIL
CSAIVGGAGGPMIISMLADATSLRTGMLIILVFVGYITFIGFWAHPLINNKTVSLKELFR
K