Protein Info for HMPREF1181_RS05680 in Bacteroides stercoris CC31F

Annotation: MFS transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 387 transmembrane" amino acids 12 to 34 (23 residues), see Phobius details amino acids 46 to 67 (22 residues), see Phobius details amino acids 75 to 92 (18 residues), see Phobius details amino acids 98 to 120 (23 residues), see Phobius details amino acids 134 to 155 (22 residues), see Phobius details amino acids 166 to 186 (21 residues), see Phobius details amino acids 206 to 227 (22 residues), see Phobius details amino acids 250 to 272 (23 residues), see Phobius details amino acids 279 to 297 (19 residues), see Phobius details amino acids 303 to 328 (26 residues), see Phobius details amino acids 337 to 356 (20 residues), see Phobius details amino acids 362 to 382 (21 residues), see Phobius details PF07690: MFS_1" amino acids 17 to 350 (334 residues), 110.9 bits, see alignment E=3.4e-36

Best Hits

KEGG orthology group: None (inferred from 89% identity to bhl:Bache_3126)

Predicted SEED Role

"Predicted glucose transporter in maltodextrin utilization gene cluster" in subsystem Maltose and Maltodextrin Utilization

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (387 amino acids)

>HMPREF1181_RS05680 MFS transporter (Bacteroides stercoris CC31F)
MNNNNNSLAKLLPMMLCFFAMGFVDLVGIASNYVKADLNLTDSQANIFPSLVFFWFLIFS
VPTGMLMNRIGRKKTVLLSLAVTFASLLLPVFGDGYALMLISFSLLGIGNALMQTSLNPL
LSNVVSGERLASSLTFGQFVKAIASFLAPYIAMWGATQAIPSLGMGWRVLFPIYMVIAVV
AILWLGTTSIHEEKEEGRPSTFGECLALLGKPFILLCFLGIMCHVGIDVGTNTTAPKILM
ERLGMSLADAGFATSLYFIFRTAGCFLGAFILQKLSARTFFGISVLCMLVAMVGLFVFHE
MTMIYVCIALIGFGNSNIFPIIFSQALLAMPQKKNEVSGLMIMGLFGGTIFPLAMGVASD
AIGQSGAVAVMTVGVLYLFFYMMKIKR