Protein Info for HMPREF1181_RS03060 in Bacteroides stercoris CC31F

Annotation: PQQ-binding-like beta-propeller repeat protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 626 signal peptide" amino acids 1 to 22 (22 residues), see Phobius details PF00149: Metallophos" amino acids 26 to 209 (184 residues), 62.4 bits, see alignment E=1.6e-20 PF13360: PQQ_2" amino acids 292 to 415 (124 residues), 64 bits, see alignment E=3.4e-21 amino acids 385 to 518 (134 residues), 52.8 bits, see alignment E=8.9e-18 amino acids 543 to 615 (73 residues), 24.8 bits, see alignment E=3.3e-09 PF13570: PQQ_3" amino acids 293 to 329 (37 residues), 24.2 bits, see alignment 7.2e-09 amino acids 331 to 369 (39 residues), 34.3 bits, see alignment 4.6e-12 amino acids 371 to 410 (40 residues), 26.7 bits, see alignment 1.1e-09 amino acids 411 to 451 (41 residues), 22.6 bits, see alignment 2.4e-08 amino acids 452 to 497 (46 residues), 18 bits, see alignment 6.3e-07 PF01011: PQQ" amino acids 312 to 348 (37 residues), 21.1 bits, see alignment 4.1e-08 amino acids 352 to 385 (34 residues), 23.3 bits, see alignment (E = 7.9e-09) amino acids 564 to 599 (36 residues), 27.1 bits, see alignment 5e-10

Best Hits

KEGG orthology group: None (inferred from 74% identity to bfr:BF0435)

Predicted SEED Role

"Serine/threonine protein kinase related protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (626 amino acids)

>HMPREF1181_RS03060 PQQ-binding-like beta-propeller repeat protein (Bacteroides stercoris CC31F)
MNRRLFTSVLFACLLPFMVQAQQAVFRFAQLTDIHLSPNNPNPTEDLLRSIAQINATDSI
DFVLVTGDIAEEGDRTTMEKVKSCLDLLKVKYYVALGNHETKWSDSGCTAFGEIFGGERF
KFEHKGFLFLGFNSGPLMRMAYGHVVPQDIRWMTETMDRYNAGNSRPDKPVILVTHYPMT
EGDVDNWYEVTDAVRPYNIRLFIGGHYHRDRDLRYDGIPGILMRSNLRDKDEKPGYGIYE
ITEDSILVYTQRIGEPKRQWAAFSLTDSYYDRNGKAEKYPDFSVNKEYAQVQEQWIVQTG
AGIYCSPAVEKDKVFVGDDLGRLTAYALKNGKKLWSFQSGKRIVGTPAVSEGIVVFGSAD
CKIYGLDAQNGNLLWTVEAAEPVLGAVTIENGIAYIGASDHTFRAVNIRTGEVKWAFAGV
RGYIETKPLVTDNKVIFGAWDNTLYTLNKADGKELWKWTGGLTRMHFSPAAVWPVAADGK
VFITDPQRAMTAIDIETGNTVWRTFQSMVRETIGLSEDKERIYSKTMNDSIVCYSTKGDQ
PHKLWASNVGFGYEHAPSMQVEKNGVVFGSTKEGLIFALEAATGKVLWKHKTGNSLISTV
VPLDNNRVLFTATSGKTGMLKFKIKK