Protein Info for HMPREF1181_RS01835 in Bacteroides stercoris CC31F

Annotation: sulfate permease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 559 transmembrane" amino acids 21 to 46 (26 residues), see Phobius details amino acids 53 to 70 (18 residues), see Phobius details amino acids 75 to 90 (16 residues), see Phobius details amino acids 96 to 117 (22 residues), see Phobius details amino acids 126 to 146 (21 residues), see Phobius details amino acids 176 to 194 (19 residues), see Phobius details amino acids 203 to 222 (20 residues), see Phobius details amino acids 256 to 278 (23 residues), see Phobius details amino acids 296 to 315 (20 residues), see Phobius details amino acids 327 to 346 (20 residues), see Phobius details amino acids 352 to 373 (22 residues), see Phobius details amino acids 386 to 416 (31 residues), see Phobius details TIGR00815: sulfate permease" amino acids 14 to 548 (535 residues), 382.4 bits, see alignment E=1.7e-118 PF00916: Sulfate_transp" amino acids 22 to 391 (370 residues), 286.1 bits, see alignment E=3.7e-89 PF01740: STAS" amino acids 451 to 547 (97 residues), 51.9 bits, see alignment E=5.6e-18

Best Hits

KEGG orthology group: K03321, sulfate permease, SulP family (inferred from 91% identity to bhl:Bache_0711)

Predicted SEED Role

"Sulfate permease" in subsystem Cysteine Biosynthesis

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (559 amino acids)

>HMPREF1181_RS01835 sulfate permease (Bacteroides stercoris CC31F)
MKAFEFKPKLYTALKNYSKELFMADLMAGIIVGIVALPLAIAFGIASGVSPEKGIITAII
AGFIISLLGGSKVQIGGPTGAFIVIIYGIIQQYGEAGLIVATLMAGVILILLGVFKLGAV
IKFIPYPIIVGFTSGIAVTIFTTQIADVFGLNFGGEKVPGDFIGKWLVYFRHFDTVNWWN
TVVSIASIVIIAITPKFSKKIPGSLIAITVVTVAVYLMKMYGGIDCIDTIGDRFSIKAEL
PDAVMPALDWEAIKNLFPVAITIAVLGAIESLLSATVADGVIGDKHDSNTELIAQGVANM
ATPLFGGIPATGAIARTMANINNGGKSPVAGIVHAVVLLLILLLLMPLAQYIPMGCLAGV
LVVVSYNMSGWRVFKALLKNPKSDVTVLLITFFLTVIFDLTVAIEVGLVIACVLFMRRVM
ETTEISVIKDEIDPNAETDITTNEEHLIIPKGVEVYEINGPYFFGIATKFEEVMAQLGDR
PKVRIIRMRKVPFIDSTGIHNLESLCKMSQKEKITVVLSGVNTKVHQVLEKADFYTLLGK
ENICPNINVALERAHKLVE