Protein Info for HMPREF1181_RS01780 in Bacteroides stercoris CC31F
Annotation: acetyl-CoA hydrolase/transferase family protein
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 51% identical to SCPC_ECOLI: Propionyl-CoA:succinate CoA transferase (scpC) from Escherichia coli (strain K12)
KEGG orthology group: None (inferred from 94% identity to bhl:Bache_0741)MetaCyc: 51% identical to propionyl-CoA:succinate CoA transferase (Escherichia coli K-12 substr. MG1655)
RXN0-268 [EC: 2.8.3.27]
Predicted SEED Role
"Propionyl-CoA:succinyl-CoA transferase"
MetaCyc Pathways
- (S)-lactate fermentation to propanoate, acetate and hydrogen (10/13 steps found)
- pyruvate fermentation to propanoate I (5/7 steps found)
- conversion of succinate to propanoate (2/3 steps found)
- anaerobic energy metabolism (invertebrates, mitochondrial) (6/10 steps found)
- superpathway of anaerobic energy metabolism (invertebrates) (10/17 steps found)
- L-glutamate degradation VIII (to propanoate) (5/11 steps found)
Isozymes
No predicted isozymesUse Curated BLAST to search for 2.8.3.27
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (498 amino acids)
>HMPREF1181_RS01780 acetyl-CoA hydrolase/transferase family protein (Bacteroides stercoris CC31F) MAFNYISAAEAASLIKHGYNIGLSGFTPAGTAKAVTAELAKIAEAEHAKGNPFQVGIFTG ASTGDSCDGVLSRVKAIRYRAPYTTNPDFRKAVNNGEIAYNDIHLSQMAQEVRYGFMGKV NVAIIEACEVTPDGKIYLTAAGGIAPTICCLADQIIIELNAAHSKNAMGLHDVYEPLDPP YRREIPIFKPSDRIGQPYIQVDPKKIVGIVETNWPDEARSFAAADPLTDKIGQNVADFLA ADMKRGIIPSTFLPLQSGVGNIANAVLGALGRDKTIPAFEMYTEVIQNSVIGLIREGRVK FGSACSLTVTNDCLNGIYEDMDFFRDKLVLRPSEISNSPEVVRRLGIISINTAIEADLYG NVNSTHIGGTKMMNGIGGSGDFTRNAYISIFTCPSVAKEGKISAIVPMVSHVDHSEHDVN IIVTEQGVADLRGKSPKERAQAIIENCVHPDYKNILWDYLKLTDGKAQTPHSMRAALAMH AELAKSGDMKNVDWAQYK