Protein Info for HMPREF1181_RS01585 in Bacteroides stercoris CC31F

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 331 transmembrane" amino acids 12 to 35 (24 residues), see Phobius details amino acids 64 to 85 (22 residues), see Phobius details amino acids 96 to 128 (33 residues), see Phobius details amino acids 140 to 167 (28 residues), see Phobius details amino acids 179 to 199 (21 residues), see Phobius details amino acids 228 to 247 (20 residues), see Phobius details amino acids 259 to 276 (18 residues), see Phobius details amino acids 282 to 302 (21 residues), see Phobius details amino acids 310 to 329 (20 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 73% identity to bhl:Bache_0780)

Predicted SEED Role

"FIG00936973: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (331 amino acids)

>HMPREF1181_RS01585 hypothetical protein (Bacteroides stercoris CC31F)
MRSQRFQNRVTAGRFTLPAAILISVACWILSAILLPDLEIRKGNYPLWDIFYSSCIPTWG
TRLFSFILYSVIGYFLIGLNNAFAIIRMRASVQTAIYFLLISVCPTMHILYAGDLVAVTF
LIALYFLFKSYQQSKSASYLFHAFVFIGMGSLLFPQLIFFVPVFWIGAYNFQSLHPKSFF
ASLIGWSVPYWFLLGYAYLSGHMDLFYQPFLELVNFRSILFGFRPWELATIGYILLLYMV
SSSHCLVAGYEDKIRTRSYLHFLIFLNFCIFIYIGLQPALYPHLFSLLLIGTSILIGHLF
VLTNSRSSNLFFIIMLVGLFTLFGFNLWTLL