Protein Info for HMPREF1181_RS00050 in Bacteroides stercoris CC31F

Annotation: threonine synthase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 433 PF14821: Thr_synth_N" amino acids 2 to 78 (77 residues), 67.5 bits, see alignment E=9.3e-23 TIGR00260: threonine synthase" amino acids 66 to 401 (336 residues), 304.2 bits, see alignment E=6.1e-95 PF00291: PALP" amino acids 96 to 378 (283 residues), 94 bits, see alignment E=1.1e-30

Best Hits

KEGG orthology group: K01733, threonine synthase [EC: 4.2.3.1] (inferred from 93% identity to bhl:Bache_1166)

Predicted SEED Role

"Threonine synthase (EC 4.2.3.1)" in subsystem Threonine and Homoserine Biosynthesis (EC 4.2.3.1)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 4.2.3.1

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (433 amino acids)

>HMPREF1181_RS00050 threonine synthase (Bacteroides stercoris CC31F)
MQYYSTNKQAPDVTLEEAVVKGLAADKGLFMPFTIKPLPQEFYDSIDTLGFQEIAYRVAD
AFFGEDVPADTLKQIVYDTLSFDVPLVKVTENIYSLELFHGPTLAFKDVGGRFMARLLGY
FIRKEGKKQVNVLVATSGDTGSAVANGFLGVEGIHVYVLYPKGKVSEIQEKQFTTLGQNI
TALEVDGTFDDCQALVKAAFMDKELNSRLQLTSANSINVARFLPQAFYYFYAYAQLKRAG
KAANAVICVPSGNFGNITAGLFGKRMGLPIKRFIASNNRNDIFYQYLQTGVYTPRPSVAT
IANAMDVGDPSNFARVLDLYGGSHAAISAEISGAAYTDEQIAETVKNVWTDEHYLLDPHG
ACGFRALQEGLQPGETGVFLETAHPAKFKDTVENIIGEAVQIPEKLQAFMRGEKKSLPMS
KDFADFKRYLMNI