Protein Info for HGI48_RS20050 in Dickeya dianthicola 67-19
Annotation: DUF484 domain-containing protein
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 62% identical to YIGA_SALTY: Uncharacterized protein YigA (yigA) from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
KEGG orthology group: K09921, hypothetical protein (inferred from 94% identity to ddd:Dda3937_00298)Predicted SEED Role
"Protein of unknown function DUF484"
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A0A7L9RI95 at UniProt or InterPro
Protein Sequence (233 amino acids)
>HGI48_RS20050 DUF484 domain-containing protein (Dickeya dianthicola 67-19) MKNVEEQVECQALTDDLLLQYLRQHPDFFIRHSHQTETLRIPHPVRGSVSLVEWQLARQR NRIQYLEEEIVLLTEQATRNEELFSQLLQLQMALSTAASLQELLDRLHRWARKLGLSGAA IRLFADRWRIGAPSDFTHLALNRTVFEPLRIQRLGERHHYLGTLNGPELLLLLPQARHVG SVALSLMGKNGDLGLLIFSSRDSHHYQDGMGIDLLQHLATIIPVLLERWIERL