Protein Info for HGI48_RS18705 in Dickeya dianthicola 67-19

Annotation: LLM class flavin-dependent oxidoreductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 436 TIGR03860: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family" amino acids 3 to 413 (411 residues), 544.4 bits, see alignment E=8.7e-168 PF00296: Bac_luciferase" amino acids 12 to 367 (356 residues), 186.7 bits, see alignment E=3.6e-59

Best Hits

Swiss-Prot: 56% identical to MOXC_BACSU: Putative monooxygenase MoxC (moxC) from Bacillus subtilis (strain 168)

KEGG orthology group: None (inferred from 97% identity to ddd:Dda3937_00454)

MetaCyc: 56% identical to N-acetyl-S-alkylcysteine sulfoxide C-monooxygenase (Bacillus subtilis subtilis 168)
1.14.14.-

Predicted SEED Role

"Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases"

MetaCyc Pathways

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A7L9RJQ8 at UniProt or InterPro

Protein Sequence (436 amino acids)

>HGI48_RS18705 LLM class flavin-dependent oxidoreductase (Dickeya dianthicola 67-19)
MLQGAAGNMSAWRHRNVVPDASINFGFVLDTAKKAEQGKFDFVFVADGLYINEKSIPHFL
NRFEPLTLLSALAASTHHIGLVGTLSTSYSEPFTTARQFASLDHLSHGRAGWNVVTSPLE
GSAKNFSRAQHPEHALRYRIADEFLQVVKGLWDSWEDDAFIRDKASGRFFDPQKLHTLNH
QGEFFSVAGPLNIGRTPQGRPIIFQAGASDDGKKLAASHADAIFTHQHTLAEAQAFYRDV
KQQLAEHGRREDQLHIFQGVSVLVGDSAEDVERQYQDTAALVTIKDALNYLGRYFEHYDF
SQHPLDEPFPDIGALGQNSFRSTTDEIKRNARERGLTLRQAALEATTPRPLFSGTPQQVA
DGLQWWFEQRAADGFIIQSATPDNFTRFVDQVVPLLQQRGLFRREYPGYTLRDSLALDYP
ANHYAAARQPAEETAP