Protein Info for HGI48_RS14010 in Dickeya dianthicola 67-19
Annotation: alkene reductase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
KEGG orthology group: None (inferred from 92% identity to srr:SerAS9_3187)MetaCyc: 58% identical to nitroglycerin reductase (Agrobacterium tumefaciens)
1.7.1.-; 1.7.1.-
Predicted SEED Role
"NADH:flavin oxidoreductase/NADH oxidase family protein"
MetaCyc Pathways
- nitroglycerin degradation (2/5 steps found)
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A0A7L9RF58 at UniProt or InterPro
Protein Sequence (363 amino acids)
>HGI48_RS14010 alkene reductase (Dickeya dianthicola 67-19) MANQQLFQPYNLGPLALSNHIVMAPLTRNRAGAGLVPSELAATYYAQRATAGLLITEATQ ISAQAQGYQDTPGIYTQAQIDGWRKVTDAVHAKGGRIFVQLWHVGRISHVDLQPDGGAPV APSAIRAETKTFVNNGFSDVSAPRALELGEIKGIIEDFRKASANAITAGFDGVEIHGANG YLLEQFLKDGANQRTDEYGGSVENRARLLLEVTAAVKDEIGAERTGVRISPVSPANAISI SDPQPQYDYLVEQLDTLGVVYLHVVEGATGGPRDVSPFDYDSLRRRFKNTYIGNNGYDLA LASTQLSEGHADLFAFGRPFIANPDLVERLKTGAPLATLVPETLYGGGAEGYTDYPVLSD VSK