Protein Info for HGI48_RS13755 in Dickeya dianthicola 67-19
Annotation: acyl carrier protein
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
No protein families (PFam or TIGRFam), signal peptides, or transmembrane helices were found in this protein.
Best Hits
Swiss-Prot: 38% identical to ACPK_BACSU: Polyketide biosynthesis acyl-carrier-protein AcpK (acpK) from Bacillus subtilis (strain 168)
KEGG orthology group: K02078, acyl carrier protein (inferred from 89% identity to dda:Dd703_1420)MetaCyc: 38% identical to PedN acyl-carrier protein (symbiont bacterium of Paederus fuscipes)
Predicted SEED Role
No annotation
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A0A3A4C1S5 at UniProt or InterPro
Protein Sequence (83 amino acids)
>HGI48_RS13755 acyl carrier protein (Dickeya dianthicola 67-19) MSHKSKEDIFNIIVHNLLEILPYLDTSTITLEQSMKDVGANSIDRADVLLSSMETLDLIF PLHEAGDLKNIGELVDFLHAKAQ