Protein Info for HGI48_RS10020 in Dickeya dianthicola 67-19

Annotation: murein biosynthesis integral membrane protein MurJ

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 511 signal peptide" amino acids 1 to 22 (22 residues), see Phobius details transmembrane" amino acids 31 to 48 (18 residues), see Phobius details amino acids 83 to 110 (28 residues), see Phobius details amino acids 130 to 152 (23 residues), see Phobius details amino acids 161 to 182 (22 residues), see Phobius details amino acids 188 to 208 (21 residues), see Phobius details amino acids 230 to 256 (27 residues), see Phobius details amino acids 274 to 292 (19 residues), see Phobius details amino acids 311 to 333 (23 residues), see Phobius details amino acids 354 to 374 (21 residues), see Phobius details amino acids 383 to 402 (20 residues), see Phobius details amino acids 408 to 427 (20 residues), see Phobius details amino acids 448 to 466 (19 residues), see Phobius details amino acids 478 to 501 (24 residues), see Phobius details TIGR01695: murein biosynthesis integral membrane protein MurJ" amino acids 2 to 502 (501 residues), 544.6 bits, see alignment E=1.2e-167 PF03023: MurJ" amino acids 28 to 478 (451 residues), 510.8 bits, see alignment E=3.1e-157 PF14667: Polysacc_synt_C" amino acids 353 to 500 (148 residues), 36.5 bits, see alignment E=5.4e-13

Best Hits

Swiss-Prot: 78% identical to MURJ_ECO57: Probable lipid II flippase MurJ (murJ) from Escherichia coli O157:H7

KEGG orthology group: K03980, virulence factor (inferred from 94% identity to ddd:Dda3937_01605)

MetaCyc: 78% identical to lipid II flippase MurJ (Escherichia coli K-12 substr. MG1655)
TRANS-RXN0-286

Predicted SEED Role

"Proposed peptidoglycan lipid II flippase MurJ" in subsystem ZZ gjo need homes

MetaCyc Pathways

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A7L9RDG9 at UniProt or InterPro

Protein Sequence (511 amino acids)

>HGI48_RS10020 murein biosynthesis integral membrane protein MurJ (Dickeya dianthicola 67-19)
MNLLKSLAAVSSMTLLSRVLGFVRDAVVARVFGAGMATDAFFVAFKLPNLLRRVFAEGAF
SQAFVPILAEYKNQQGEEAARTFLAYVAGMLTLILALVTVAGMLAAPWVIMVTAPGFAST
PERFELTSALLRITFPYILLISLTSMAGSVLNTWNRFSVPAFAPTLLNISMIGFALLGAR
WFNPPVIALGWAVVAGGVLQLGYQLPYLKKIGMLVLPRIKFYDPSVSRVMKLMAPAILGV
SVSQISLIINTIFASFLSQGAVSWMYYADRLMEFPSGVLGVALGTILLPSLSKSVASGNH
QEYSRLMDWGLRLCFLLALPATVALGLLAKPLTVALFQYGKFSAFDALMTQRALVAYSVG
LMGLILVKVLVPGFYARQDIKTPVKIGMTTLVMTQLMNLVFVGPLQHAGLALSIGLASCI
NAGLLFWQLRRQRIFEPQPGWKAFLSRLVAAVVVMSLVLSALGLWMPPWDQGSMTMRLLR
LSAVVVAGGGSYFAVLALLGFRPKDFSRRSI